Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01084 GTACCATATAACTCACTTTTATTATTTTTCCTTCAGTTAGGATCCGTTCACTTCATCTTTATCAACCGCACAAAGCAGGAGAATTATCTTTTCTTTCTGCAACCACTTTCTCTCTGCAAGACTTCAACTCAACCCAATTCTTTCTTTATTTTCTTTGTACCCCCGTTTAATCATTTTTCGTCCTCTCACATACACAGCCTGTTTGTCTGACAAACTCTAACACGTCCTAGCTGCTCCCCAAAAGTTCTTCCACTAATTCTCCAACCCCCCCAAGCACCAAAGTGATCAAAAGATTTGGTGAACAAAACAAACTAATTGTAGTTGGTAACCATATCCTTTCACTATTTGTCTCTTGCCCTCCATCCTAGCTTTTTTCTACACCATGAACTTGTAGTCCTCAACATGTTGCATCACCCAAGGGAATCATGATCCTTAATTTTCAGAATCTCCATTTATGGTGGCGACTCTCATCCTTTCTGCTTCTACTTCTTCAATCTGTTACATCTCAATCTTTTCCATCTCTTGACTCTGATGGAACTCACTTGCTTAAATTCAAATACTCCATCCTCAACGACCCTTTATCAGTCTTAGAGAGCTGGAACTATGATGACGCAACACCATGTTCATGGCGTGGTGTGACATGCACTGAAGTTGGAACCCCTGGTACCCCTGATTTGTTCAGAGTAACTAGCCTGGCCCTTCCCAGTAGCCAACTTTTGGGTTCTGTTTCTGAAGACTTAGGTTTGATCCAATACCTTCGCCACGTCGATCTCTCCAACAATTTCCTTAATGGCTCTCTACCCAAAACTATCTTCAACTCTTCCCAGCTTCAAGTACTTAACCTCTCAAACAATGTTATCTCAGGTGAATTACCTGAGCTAATTGGTAATATGACGAACCTCAAACTTCTCAACCTCTCTGACAATGCATTTGCCGGGTTGATCCCAGAAAACCTCCCTACTTTATCTAACTTAACCGTTGTTTCTTTGAAGAGTAACTACTTTTCTGGTGGTGTCCCAACCGGGTTCAACTACGTGGAGATTTTGGATCTGTCCTCCAATTTGCTCAACGGTTCTTTACCAAATGACTTTGGTGGCGAAAGCTTGCGCTACCTGAACCTCTCTTACAACAAGATTTCGGGAACAATACCTCCAGCATTTGCGAAACAGATTCCTGTCAACACAACGGTGGACCTGTCATTCAACAATCTGACAGGAGCAATTCCAGGGTCTCAGGCTTTACTAAACCAGAAGACAGAGTTTCTATCAGGGAATGCTGATCTTTGTGGAAAGCCTCTTAAGATTCTTTGCACTGTTCCCTCTACTGAGTCCACAGCTCCACCCAACCTTACCACGTCTTCACCAGCCATTGCAGCCATACCAAAAACAATTGATTCAACCCCTTCAACAAACTCAACAGGAACCACCAGTTCTCAGAATGTATCCCCAAGTGGCCTAAAACCTGCCATCATAGCAGCAATTGTGGTAGGAGACCTAGTTGGCATGGCCCTGTTAGCCCTCATCATTCTCTTCATCTACCAACAGAGAAAGAAAAGATATCCAAATCCAAAACCAAACACTAGTACTTCTTCTATTAACAACTCAGGAAAGAATAAAGAGGAAACTGTTTCAAGACAAGATGGCGAAGTAAGAAGCGTAACAGCTTCACTTCCTTGTTCCTGTTTAACAATCAAAGGAGAAGAAACTTCAGAAGCAACAAGCTCGGACAGTGACCGCGAGAGCAACACCACCGCGGACATCATAGCTGCACAAAACGGGAACTTTCCAAAACACAGCAAACTTGTAACTGTGGACGGGGAAACAAATTTGGAGCTCGAGATTTTGCTTAAGGCTTCGGCGTATATTTTGGGAAACAGCCACGTCAGCATTGTTTACAAGGCGGTGCTCGAGGATGGGAGAGCCTTTGCTGTTAGAAGGATCGGTGAATGTGGCATTGAGAGAATGAAGGACTTCGAGAACCAAGTTCGTGCCATTGCAAAGCTTCGCCATCCCAACTTGGTTAAGGTTCGTGGCTTCTGCTGGGGTCAAGATGATAAACTCCTAATATGTGACTATGTCCCCAATGGCAGCCTCGCTACCATAGATCACACTCACAGAAGGGCAGGTACATCTCCTTTGAACTTGTCCTTGGAGGCGCGGTTGAAGATAGCAAAAGGGGTGGCACGAGGGTTAGCCTTCATTCATGAGAAGAAACACGTGCATGGCAACGTTAAACCCAGCAACATCCTGTTAAGCTCAGAAATGGAACCCATAATAAGCGATTTTGGGGTGGACCGCCTCTTCTTGCATGACGTCACCCAGAGAGCAAACGATTCGGCTAGGCAATTAACGTTGAACCAAAGAAACCAACAAGACCTCCCATTCGGTTCAAGCCCCTACGCAACAATGGGATCATCGTCTAGTACCGGGTGCCAAATAATGCACTATCATGCACCAGAGTCACTTCAAAACATCAAACCCAGCAACAAGTGGGACGTGTACTCTTTTGGCGTGGTCTTGCTCGAGCTTCTAACCGGGAGGGTTTTCTTGGACCGGGAGTTGGAGCAGTGGCAGGAACCGGGTTCAGGTGAAGAAGACAAGAACCGTGCCCTCAGGATGGCTGACGTGGCAATTAAATCTGACATAGAAGGGAGAGAAAATGTGCTATTGGCGTGGTTCAAGTTGGGGCTTAGCTGTGTTTCTCATGCCCCACAAAAGAGACCGTCCATGAAAGAGGCACTACAAATCTTAGACAAGATCCCTGCTGCTGCTCCCGTCAATTAATTCTTCTTCATAATGATGTCATTCATGTGTTCCACACCCCGTTTATAGATCAAGCTGTTTATCCTTTTCCATCTTTTGTTGACCTCAATTAGTATCAAGAGGGGAAAAGATTAGAGACAAGTGTTTGTTTATGATCATCGTAACTTTGACCACTGAATCGAATCCTTGTCTGATCTTATATCAGTAATTTAACGCCAATGCACGTGGTTTTCTGCTCGAGGATTAGAAAAATAATGAGTGTAAAGATGTTATTGATGGCTTGGCATAGATAATGAGTGTCCATTGAAGGGTTTTGTTTCGCGTTGAATCTTAAAATGGTTTATCTGTATTTTTCAGACAAATGACCAGCACTGCTCATCTGCCTTATGTTAGTTATTTTGTCCGTATTTCCTTTTATTCTACCTGAAAATTGTTGAGATTTAGACGAGAAAAAAGAGTGAGACGTCTCTTCTGTTGTATGGCTAAAATCAAAGTCTGATGGAAAGAGCCAAATGCCATCATTTCAGCGAAACCAGATTTCTTTACGAAGCTTCCCCAACACGGTTTCATCAAGTGCAACCTTGAAGCAGCTTTTGAGAAAAAGGAAAATACTACTAGTTGGCGAATTTGTTTTAGAGATAACAGAGGAGGTTTTGTTTCGGCAATATCAAACAGCCTTGTTAACTGGTTTTGGAAAGTGAGGTACTTGGTCTACTTCAAACACTTCACTATGCAATAAACCATGAATGCAAGTTTGTCTTAGACAAAATTAAAAATTCTCATTCTGATATTTTTTAACTGGAAGCTGTCATTATTGTCACAGTAGTCAAATTTATATACCGTAAATTTATTATTTTTTACCGATCAATACTAGTATTCAAAGAATGGAATATATTTAATTAATAAATACCCTACCTTTATCCACCA 3689 0.4245 MILNFQNLHLWWRLSSFLLLLLQSVTSQSFPSLDSDGTHLLKFKYSILNDPLSVLESWNYDDATPCSWRGVTCTEVGTPGTPDLFRVTSLALPSSQLLGSVSEDLGLIQYLRHVDLSNNFLNGSLPKTIFNSSQLQVLNLSNNVISGELPELIGNMTNLKLLNLSDNAFAGLIPENLPTLSNLTVVSLKSNYFSGGVPTGFNYVEILDLSSNLLNGSLPNDFGGESLRYLNLSYNKISGTIPPAFAKQIPVNTTVDLSFNNLTGAIPGSQALLNQKTEFLSGNADLCGKPLKILCTVPSTESTAPPNLTTSSPAIAAIPKTIDSTPSTNSTGTTSSQNVSPSGLKPAIIAAIVVGDLVGMALLALIILFIYQQRKKRYPNPKPNTSTSSINNSGKNKEETVSRQDGEVRSVTASLPCSCLTIKGEETSEATSSDSDRESNTTADIIAAQNGNFPKHSKLVTVDGETNLELEILLKASAYILGNSHVSIVYKAVLEDGRAFAVRRIGECGIERMKDFENQVRAIAKLRHPNLVKVRGFCWGQDDKLLICDYVPNGSLATIDHTHRRAGTSPLNLSLEARLKIAKGVARGLAFIHEKKHVHGNVKPSNILLSSEMEPIISDFGVDRLFLHDVTQRANDSARQLTLNQRNQQDLPFGSSPYATMGSSSSTGCQIMHYHAPESLQNIKPSNKWDVYSFGVVLLELLTGRVFLDRELEQWQEPGSGEEDKNRALRMADVAIKSDIEGRENVLLAWFKLGLSCVSHAPQKRPSMKEALQILDKIPAAAPVN 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01084 785 FunFam Leucine-rich repeat receptor-like protein kinase 33 199 - -
Pste4g01084 785 SUPERFAMILY L domain-like 36 293 - -
Pste4g01084 785 Gene3D Transferase(Phosphotransferase) domain 1 551 783 - -
Pste4g01084 785 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Pste4g01084 785 MobiDBLite consensus disorder prediction 320 341 - -
Pste4g01084 785 Pfam Protein kinase domain 480 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01084 785 Pfam Leucine Rich Repeat 226 246 IPR001611 GO:0005515
Pste4g01084 785 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 88 777 - -
Pste4g01084 785 SUPERFAMILY Protein kinase-like (PK-like) 480 778 IPR011009 -
Pste4g01084 785 Gene3D Ribonuclease Inhibitor 33 202 IPR032675 -
Pste4g01084 785 Gene3D Ribonuclease Inhibitor 203 297 IPR032675 -
Pste4g01084 785 MobiDBLite consensus disorder prediction 378 407 - -
Pste4g01084 785 Gene3D Phosphorylase Kinase; domain 1 437 550 - -
Pste4g01084 785 MobiDBLite consensus disorder prediction 378 397 - -
Pste4g01084 785 CDD TM_EGFR-like 348 377 - -
Pste4g01084 785 ProSiteProfiles Protein kinase domain profile. 475 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01084 785 ProSiteProfiles Leucine-rich repeat profile. 134 156 IPR001611 GO:0005515
Pste4g01084 785 FunFam Leucine-rich repeat receptor-like protein kinase 203 297 - -
Pste4g01084 785 Pfam Leucine rich repeat 110 168 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01084 Pste-Chr4 8269809 8273584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01084 32 778 Receptor kinase-like Gene Family AT2G15300 50.393 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste4g01084 Pkinase 2.8e-31 CL0016