Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01068 ACTTAACAAGCAAGACCCTCCCTCAGCCCTAAGTCCTAAGCCCTAAGCCCTCTCACTCCTATAACTCCTATAACTCTGTTTTGTCTTCTTTACTTGGAAATCCATACACATGGGAAGCCTTGAAGCTGAAAGAACTACTGTCGGATGGGCTGCAAGAGACCCTTCTGGGATTCTCTCCCCTTACACCTACACTCTTAGGTTCTTTCCCTTTTTTAAACCTTCTCTTTTCTCATCTCTCTCTCACCCTCTCTTCTCTCTCCACCATGCAGAAACACTGGCCCCGACGACGTTTACATCAAAGTTCACTACTGTGGAATTTGCCATTCTGATCTCCACCAGATTAAAAATGATCTTGGCATGTCTAACTATCCCATGGTCCCCGGACATGAAGTGGTCGGTGAGGTACTCGAGATGGGGTCAAATGTCAGCAGGTTCAGAGTCGGTGAAGTCGTTGGTGTTGGCCTCCTCGTAGGTTGTTGCAAAAACTGCGGGCCATGCCTATCAGACATCGAACAATACTGCAGCAAAAAGATCTGGTCTTACAATGATGTTTATGTGGATGGGAAACCCACTCAGGGTGGTTTTGCCGAAACCATGATCGTCGAGCAGAAGTTTGTGGTGAAAATTCCAGAGGGTATGGCGGCAGAGCAGGTAGCACCGTTGCTGTGTGCGGGTGTGACAGTGTACAGTCCACTGTCACATTTTGGACTGAGAGAGAGGGGTCTGAGAGGTGGAATATTGGGGCTTGGAGGAGTGGGACACATGGGGGTGAAGATAGCAAAGGCAATGGGACACCATGTGACTGTGATAAGCTCTTCTGACAGGAAGAAAAAAGAGGCACTTGAAGACCTTGGAGCAGACAAATATCTTGTCAGCTCTGATGCCACTGCTATGCAGGAAGCTGCTGATTCTCTTGACTACATTATTGACACTGTGCCTGTTGGCCACCCTCTTGAGCCTTATCTCTCCCTTCTCAAACTTGATGGCAAGCTCATCTTGATGGGAGTCATCAACACCCCTCTGCAATTTGTCAGCCCCATGGTCATGCTTGGGAGAAAATCAATTACAGGAAGCTTCATTGGTAGCATGAAAGAGACAGAGGAGATGTTGGAGTTTTGGAAAGAGAAGGGTCTGAGTTCCATGATTGAAGTGGTCAATATGGATTACATTAACAAAGCCCTTGAAAGGTTGGAGAAAAATGATGTGAGATACAGGTTTGTAGTGGATGTCAATGGCAGTAAACTTGATCAGTGAAGTGTGCTGTCAGTGGCACTGCACACGCATCAATCATCATCATCACCAACTATAGTTGTATTGTTTTTTAATACGAGTGCTCTGTTTTCGTGACACGCCTTTCATACAAATATTTTATATTAAATTCTCCTTTTCTCGTGAAAGCAAAAGATACCAAACTTCTGACTTGTCCACTGTACAATATCGATTCTGTTCCACCAATAAAGAAAGAAAATATAAAATGATATTAATGGGGATGGATTGGGTTAACAACAACCAACTATTTTGAGGAACTTGAGAATTACTTCCTCTGACCTTTCATTCCCTAATCTTTGATAGTCAGACATTCTCTCAAGTCTCAACCACATTTTGGTTTCACATTCTTCCTACTTCCGCCTCGTCTTAATATTGTGTGAATTTATCATGTCACTTGCCTTTGAATTTGATTGTTCAAAGTGGTAACAATTATAAATAAATATCAAA 1716 0.4353 MSNYPMVPGHEVVGEVLEMGSNVSRFRVGEVVGVGLLVGCCKNCGPCLSDIEQYCSKKIWSYNDVYVDGKPTQGGFAETMIVEQKFVVKIPEGMAAEQVAPLLCAGVTVYSPLSHFGLRERGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDRKKKEALEDLGADKYLVSSDATAMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSMKETEEMLEFWKEKGLSSMIEVVNMDYINKALERLEKNDVRYRFVVDVNGSKLDQ 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01068 298 Pfam Alcohol dehydrogenase GroES-like domain 3 90 IPR013154 -
Pste4g01068 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 96 259 IPR036291 -
Pste4g01068 298 PANTHER ALDEHYDE REDUCTASE 1 293 IPR047109 GO:0016616
Pste4g01068 298 Pfam Zinc-binding dehydrogenase 132 253 IPR013149 -
Pste4g01068 298 FunFam Cinnamyl alcohol dehydrogenase 105 261 - -
Pste4g01068 298 Gene3D - 105 261 - -
Pste4g01068 298 SUPERFAMILY GroES-like 3 122 IPR011032 -
Pste4g01068 298 FunFam Putative cinnamyl alcohol dehydrogenase 6 262 291 - -
Pste4g01068 298 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 9 23 IPR002328 GO:0008270|GO:0016491
Pste4g01068 298 CDD CAD1 1 290 IPR047109 GO:0016616
Pste4g01068 298 Gene3D - 2 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01068 Pste-Chr4 8204920 8206862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01068 1 296 Monolignol Biosynthesis Gene Families AT3G19450 79.730 5.12e-154 433