Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01049 ATGTGTAACTCAGCTCGCGTAAATGGGGGAATCTGTTTCCTTCTCCTCCTCTTTCTCTCTCCGTTTGCAGAAGCACAGGCCAGTGACAACAACCAAAACGGATCCTATTACAACCGCTTCAGCCCCTCCATGGCCATCATAATAGTCATCCTCATAGCGGCACTCTTCCTCATGGGCTTCTTCTCCATCTACATACGACACTGCTCCGACTCCCCCTCCGCCAGCATCAGAAACATCGCCGGAGCAGCCGGACGCTCACGCCGGGCATCCCGCGGCCTGGACCCGGCGGTCATCGACACCTTCCCCACGCTCGAGTACTCCACGGTCAAGATCCACAAGCTCGGAAAGGGGACGCTGGAATGCGCGGTCTGCCTCAACGAATTCGAGGACACCGAAACGCTGCGTTTGATCCCCAAGTGCGATCACGTCTTCCACCCCGACTGTATCGACGAGTGGCTCGCCTCCCACACAACCTGCCCTGTCTGCCGCGCCAACCTCGCTCCCCAGCCAGGTGACTCCGTCCACGGACTCCCCATCCTCGACGCTCCTCCGCCGCTCGACATCGAGGCCCTCGACTCCGCTCCCGACCACCAAGACCAAGACGCCAACTCCCACGCCAAGGCCCCACCACTTTCCACGGATCAGCCCCAAGTCCTGTGCCTAAACCAGACTCTGAACCGGAACCGCACCAGAGGGTCGCGGTCCGGACGCCCTCGCCGCTTCCCCCGCTCTCACTCCACCGGCCATTCTTTAGTCCAACCGGGTGAAGACACTGAACGCTTTACCCTAAGGCTGCCCGACCAAGTTAGAAAACAGATACTATTGGACCCCCAACTGCAAAGGGCAAGAAGCTTAGTTATCTTACCCAGAGAAAGTAGTTCACGCCGTGGATATCGAACCGGCACCGGCACCGGCGAGGGAAGTAGCAGAGGGAGGACTTCAAGACGCTTGGACCCAGCCTTTAAATCCGACAGATGGGTTTTCACTATGGCACCACCTTTCTTAGTAAGAACCTCCTCCATTAAGTCACCCAGAGTTGCCAATAATGGAGAAGGAACCTCTGCTGCTTCTTCACTGCCACTGCCACCACCACCGGCTACTTTGGGATCCGTTTGA 1116 0.5789 MCNSARVNGGICFLLLLFLSPFAEAQASDNNQNGSYYNRFSPSMAIIIVILIAALFLMGFFSIYIRHCSDSPSASIRNIAGAAGRSRRASRGLDPAVIDTFPTLEYSTVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPDCIDEWLASHTTCPVCRANLAPQPGDSVHGLPILDAPPPLDIEALDSAPDHQDQDANSHAKAPPLSTDQPQVLCLNQTLNRNRTRGSRSGRPRRFPRSHSTGHSLVQPGEDTERFTLRLPDQVRKQILLDPQLQRARSLVILPRESSSRRGYRTGTGTGEGSSRGRTSRRLDPAFKSDRWVFTMAPPFLVRTSSIKSPRVANNGEGTSAASSLPLPPPPATLGSV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01049 371 CDD RING-H2_EL5-like 120 163 - -
Pste4g01049 371 MobiDBLite consensus disorder prediction 344 371 - -
Pste4g01049 371 FunFam E3 ubiquitin-protein ligase ATL6 82 169 - -
Pste4g01049 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 169 IPR013083 -
Pste4g01049 371 SMART ring_2 121 162 IPR001841 -
Pste4g01049 371 MobiDBLite consensus disorder prediction 205 231 - -
Pste4g01049 371 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Pste4g01049 371 MobiDBLite consensus disorder prediction 295 310 - -
Pste4g01049 371 MobiDBLite consensus disorder prediction 286 318 - -
Pste4g01049 371 MobiDBLite consensus disorder prediction 174 258 - -
Pste4g01049 371 Pfam Ring finger domain 120 163 IPR001841 -
Pste4g01049 371 SUPERFAMILY RING/U-box 116 170 - -
Pste4g01049 371 PANTHER RING FINGER DOMAIN-CONTAINING 26 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01049 Pste-Chr4 8113081 8114196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01049 11 358 Rapid Response to Elicitors AT3G05200 44.648 1.07e-95 289
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01049 4 8113081 8114196 Pste4g01049 4 8113081 8114196 ECH