Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01045 ATGGACGATATGGACATGGACATTCCCCTCCCCGAGGAACTCGAATTTCTCGAATCAAATTCTCACTTCGCTGAAGAACAAGAACAAGAAGAAGACCATCACTACTTCTTCGAAGAACTCGAATCTCGTTCTCCGCAGCCGCCGCCAGATCTCGCGGTGTCTCCCGAATCCGAATCCAACGGCGGCCACAAGCGATCGCGTCCGAACTCTCCTCCCGAAGAGGAGGAGAAGAGAGCGAAGGCTAGGGTTGCCGTCAAGGACAATTCCTCCGCCGCCGACGAGGACTGGCTCCGCTACTCTCCGCCGCAGACGGAACCGGCGGCGGAGGAACCGGCGACGTTGGCGATGGAGAAGACGCTGTCGAGGTTTGCCTCGGAGATCGACGGCGAGTGCATGCCGATCACCGCGCCTAACGGTGACAGGGTTTACGCGAAGCTGAATCGGTTCCAAGGAGAGGAGCGCGTCGCGAAGCTCGACTGCGATGGATATTCTGCTGAGCTTAGTTCAGAACCAATTAATGTTATACTTGAGAGGTTGGAGCAAGAGGCTTTTGCTAAGGCCTTGGAAGCTAGTTCGGAAGGCCAAAGTGTTGCAGAAGTTCCCGAAGCACAAATGGTTCATGAGCGACTTTGGGTTGATAAATATGCTCCGAAATCATTTACTGAGCTTCTCAGTGATGAACAGACAAATCGTGAGGTACTCTTATGGTTGAAACAATGGGATTCTATTGTGTTTGGATCTGAAATTCGAAGCACATCAGATGATGTTTTATCTTCTTTGAAACGACATTCTTCTGTTGTCCACAATCAAAAACCATTGAATTCAAAGTTTTCAAGGATGAATGGAGGATCCAAATGGAGTAATGGGAGTAGGTATATAAATTCTAGAAGTATGGATGAGGGTGGTAGTTCAAAGAGTACTCAAGATGTATATAATACAAAGTCAAGGAATATTGGTCCCCCAGAACAAAAGATCCTTCTGCTCTGTGGACCACCGGGTCTTGGAAAAACAACACTTGCTCATGTAGCTGCTAGACACTGTGGATATCATGTGGTGGAGCTTAATGCTAGTGATGATCGTTCTACATCAACAATTGAAGCCAAAATCCTTGATGTGGTCCAGATGAACTCTGTCTTGTCTGATTCAAGGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGTGCTCTTGGGGATGGCAAGGGTGCTGTGGAGGTTCTTTTAAAGATGATTTCTGCTGAAAGGAAGCCTGATGCAGGGAAACAAAATTTGGGCAAAGGACAAACTGAAAGGAAGTCAACAAAAAAGCGTTCGAAAACAGCTTCCCTGTCAAGACCTGTGATTTGCATTTGTAATGACCTGTATGCACCTGCCTTAAGACCATTACGTCAGGTAGCCAAGGTTCATATATTTGTACAACCAACAGTTTGTCGTGTGGTAAACAGGCTAACATATATATGTAACAAGGAGGGGATGAAAGCTAGTGCAGTTGCACTCACTGCTCTAGCAGAATATACAGAATGTGATATTAGATCATGCTTGAACACTCTCCAATTCCTCTCCAAGAAGAAAGAAGCCCTCAATGTGGTAAGAATTCTAAAGAACTTTTATGACGGGAATTCATACAGGCACTCTAGTGGGAGTGGAAACAGTGGTCTGTTTGATATTGGTTCTCAAGTAGTTGGCCAGAAGGACACGTCAAAGAATCCTCTAGACATATGGAAAGAGATTTTCCATAAGAGAAGAACAAAAAAAATGGAAAGAAAATATCACAGATGCAAGTCCTTTGAATTTGACTCCTTGTACTCCCTTGTGTCAAACCGTGGTGATAGTGACTTGATTCTGCACGGAATTCATGAAAATGTTTTGCAGCTGAATTACCATGACCCAGTGATGCAAAAAACTGTCAGGTGCTTCAACAATCTTGGAGTTTATGATCTAATGAATCAGTATATAATGCATACACAACAGATGACTCTTTATGTATATTTGCCCCTAGTAGCAATTTCTGTACATCATATAGTATCTCAAGTTCAGAAACCAAATATTGAGTGGCCAAAGTCACATCAGAGATATCGAACAATGATGATGGAAAAGATGGACATTTTGAATAACTGGCACCACAAAATCCCACCTCTTATTGCAAGGCACTTATCAGCTAGTTCCTTTGTTGAAGACTTAATTTCTCCATTGTTACATATTTTGTCCCCATCAACTATAAGACCGGTGTCATTACAACTACTATCTGATAAAGAGAAGGATGATATTGCTCAACTAGTTAGCACAATGGTATCATACACTATTACATATAAAACTGTTAAATCAGATGTGCTTCCTCAAACCCTGAAGTGTGAAGTAGCAGATGGCTTGGCACTTTCTCTTGTTCCTCCTATTTGTGACTTTATAAACTTCAAGGATTATACTTCAAATCATTATGTGCTTTCTGTACCTATGAAGCAAGTTTTGGTACATGAGGTTGAAAAGCATAAGATTTTACAAGGTAGTATTGACAAAACTGGGGCTTTAGCATATGGAAGGGATGGAGTTATTGAGACTAAAACTGACATCCCACTAGCCAATACCAATCATTCAACTGCAGTTGATATGAAAACTAATGAAGATCAGGTTAATGTTGTTTCAAGGCAATTGAATGCAAATCCCACGACAGTTTCATCAAAATTAAATTCCAGTAAAAGTTCAAGTGAAGCAGACAGTGGGAAACTACTAAACATGGGAAATATGAAAAAAACATCCAGAAGTTCCATGAGTTTCTTTGACAGGTTTAGAAAAGTAAATGTCAAGGGTTTACAAAGTGATGACAAATCTCTACGGGAAGAAGATACCTTGAAGAAAGATCGACACCCTTTACTTTTTAAATTTAACGAGGGCTTCACTAATGCTGTCAAAAGGCCTGTTCGTATTCGTGAATTTCTATCTTAA 2937 0.4195 MDDMDMDIPLPEELEFLESNSHFAEEQEQEEDHHYFFEELESRSPQPPPDLAVSPESESNGGHKRSRPNSPPEEEEKRAKARVAVKDNSSAADEDWLRYSPPQTEPAAEEPATLAMEKTLSRFASEIDGECMPITAPNGDRVYAKLNRFQGEERVAKLDCDGYSAELSSEPINVILERLEQEAFAKALEASSEGQSVAEVPEAQMVHERLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSIVFGSEIRSTSDDVLSSLKRHSSVVHNQKPLNSKFSRMNGGSKWSNGSRYINSRSMDEGGSSKSTQDVYNTKSRNIGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVELNASDDRSTSTIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKGAVEVLLKMISAERKPDAGKQNLGKGQTERKSTKKRSKTASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVCRVVNRLTYICNKEGMKASAVALTALAEYTECDIRSCLNTLQFLSKKKEALNVVRILKNFYDGNSYRHSSGSGNSGLFDIGSQVVGQKDTSKNPLDIWKEIFHKRRTKKMERKYHRCKSFEFDSLYSLVSNRGDSDLILHGIHENVLQLNYHDPVMQKTVRCFNNLGVYDLMNQYIMHTQQMTLYVYLPLVAISVHHIVSQVQKPNIEWPKSHQRYRTMMMEKMDILNNWHHKIPPLIARHLSASSFVEDLISPLLHILSPSTIRPVSLQLLSDKEKDDIAQLVSTMVSYTITYKTVKSDVLPQTLKCEVADGLALSLVPPICDFINFKDYTSNHYVLSVPMKQVLVHEVEKHKILQGSIDKTGALAYGRDGVIETKTDIPLANTNHSTAVDMKTNEDQVNVVSRQLNANPTTVSSKLNSSKSSSEADSGKLLNMGNMKKTSRSSMSFFDRFRKVNVKGLQSDDKSLREEDTLKKDRHPLLFKFNEGFTNAVKRPVRIREFLS 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01045 978 MobiDBLite consensus disorder prediction 294 315 - -
Pste4g01045 978 MobiDBLite consensus disorder prediction 1 111 - -
Pste4g01045 978 MobiDBLite consensus disorder prediction 18 40 - -
Pste4g01045 978 MobiDBLite consensus disorder prediction 60 93 - -
Pste4g01045 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 527 IPR027417 -
Pste4g01045 978 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 977 - -
Pste4g01045 978 Pfam ATPase family associated with various cellular activities (AAA) 326 451 IPR003959 GO:0005524|GO:0016887
Pste4g01045 978 MobiDBLite consensus disorder prediction 887 912 - -
Pste4g01045 978 CDD AAA 321 415 - -
Pste4g01045 978 MobiDBLite consensus disorder prediction 417 438 - -
Pste4g01045 978 CDD HLD_clamp_RFC 477 528 - -
Pste4g01045 978 SMART AAA_5 322 476 IPR003593 GO:0016887
Pste4g01045 978 Gene3D - 473 539 - -
Pste4g01045 978 Gene3D - 208 471 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01045 Pste-Chr4 8092141 8118551 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01045 323 520 Core DNA Replication Machinery Family AT5G22010 29.577 2.84e-13 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01045 4 8092141 8118551 Pste4g01045 4 8092141 8118551 ECH