Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01023 TCCTTCATCCTAAATGTTAACGTATAAACTTACATGTAATATCCTTTTTCTAAGTTTACCATGCATTTCAGGGACCATAAGAAAAGCCATGCCAGCAATTCCCAGAGGCTTTCAATTGGCGAAGCTTTTAATCATAAACCTAAGAGACTATCCTCTCTTTTTGCTTCCTCCTCCTCTGCCCATGACCTGAGGCATTTGGAATTGGAGAAAGAGAAAGAAGATACGACGTCACCAAGAGGAGTCTTAGAAGCCTTCATGAAAGAATTTGACTCTCACCACCAATCAGAATCACATGAATCAGAAGTCTCTTGTCCAAGCACCAGTGCACGCTCCCACTGGACCAAATTCTTCAAACTTTGGAAGAAAAAATCTTTTAAGCGCCTAGGTTCCCTCCCTCCTCTTAGTGTGCCAAAGATACCAAAGTGGAAAAGCAGAAGCAGCAGAGAAAATCAAGCTCTATGTAAGCTATACAACTTCAGGTCTTTGGTCACTTTCAGCCTCTCTGACATCAGACATGCAACCAACAATTTTAGCAATGAAAATTTAATTGGAAGGGGTGGTTTTGCTGAGGTTTACAAAGGGTGTCTCCCAGATGGCCAATTAATAGCTGTGAAGAAATTGTCTAAAGGGACCACAGATGAAAAGACCGCAGGATTTCTATCTGAGTTAGGCGTAATTGCTCATGTTCACCATCCTAATACCGCCAAGCTTATTGGATGTTGTGTAGAAGGAGAAATGCAACTTGTCTTTGAACTATCTCCATTGGGAAGTTTAGGATCTCTTCTTCATGGTTCAGATAAAAACAAATTAAATTGGAGTAGAAGGTATAAAATTGCTCTGGGAATAGCTGATGGTCTCCTCTATCTGCATGAGAGTTGTCACAGGCGAATTATTCATAGAGATATTAAGTCAGAGAATATTCTGCTCACGGACAATTTTGACCCTCAGACTAAGCTAAGCTTATCATCTATGGATGTTGTTAGCTCCTTCTATTGCTGTCATCAGCTCCTCATATTTGTGATTTTGGGCTTGCAAAGTGGTTACCAGAACAATGGACTCACCATAATCTATTTTGCACCTGAATATTTCATGCATGGAATAGTAGATGAGAAAACTGATGTTTATTCATTTGGGGTCCTACTTTTGGAGATCATAACCGGGCATCCAGCTGTGAATGATTTCCAGCAGAGTGTTGTGTTGTGGGCAAAACCTTTGCTTGACGCTAATCATATAAAGGACCTCATTGATCCTTCTCTTGGCGATAATTATGACCGAGAACAGGTAGTAACACTGCTAAGAGGCGAAGATCACGTTCTGAGATCTACAAAAGCAAGCAGAGGGAGGCCTCTCCAAAGAACATACTCGCAAGAGCTACTGGACGCTCAAGAATACAACTCAACAAAATATCTAAGAGATCTCAAACGACATGAGCAGCTTGCATTGGCTGCTTGACAACAAAGGACACGAATAGCTTGTTATAGGACTGAAAAGATGTATAAAACACTTGGGGCAAACTTCGGTAAGTGTCATCAAGTCCATGGAAATGAACAATTTAGGACACCATGGAAGTTGTTATTGCATCGATAGACATTACATGATTAGCTCACATCAGGTTTTCATTGCACAATATTCCATGGAGCAACGTGTACAGTTTCTGTTGGCAATGTTACTTATTATTATATGTACACTATTTATTATGCATGTGTACCTTCGAAACATCA 1721 0.4033 MHFRDHKKSHASNSQRLSIGEAFNHKPKRLSSLFASSSSAHDLRHLELEKEKEDTTSPRGVLEAFMKEFDSHHQSESHESEVSCPSTSARSHWTKFFKLWKKKSFKRLGSLPPLSVPKIPKWKSRSSRENQALCKLYNFRSLVTFSLSDIRHATNNFSNENLIGRGGFAEVYKGCLPDGQLIAVKKLSKGTTDEKTAGFLSELGVIAHVHHPNTAKLIGCCVEGEMQLVFELSPLGSLGSLLHGSDKNKLNWSRRYKIALGIADGLLYLHESCHRRIIHRDIKSENILLTDNFDPQTKLSLSSMDVVSSFYCCHQLLIFVILGLQSGYQNNGLTIIYFAPEYFMHGIVDEKTDVYSFGVLLLEIITGHPAVNDFQQSVVLWAKPLLDANHIKDLIDPSLGDNYDREQVVTLLRGEDHVLRSTKASRGRPLQRTYSQELLDAQEYNSTKYLRDLKRHEQLALAA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01023 463 ProSiteProfiles Protein kinase domain profile. 157 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01023 463 SMART serkin_6 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01023 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Pste4g01023 463 PANTHER OS08G0249100 PROTEIN 35 420 IPR046958 -
Pste4g01023 463 ProSitePatterns Protein kinases ATP-binding region signature. 163 186 IPR017441 GO:0005524
Pste4g01023 463 SUPERFAMILY Protein kinase-like (PK-like) 137 404 IPR011009 -
Pste4g01023 463 Gene3D Transferase(Phosphotransferase) domain 1 234 456 - -
Pste4g01023 463 Gene3D Phosphorylase Kinase; domain 1 119 231 - -
Pste4g01023 463 Pfam Protein tyrosine and serine/threonine kinase 160 379 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01023 Pste-Chr4 7904544 7907996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01023 122 413 Receptor kinase-like Gene Family AT1G53420 39.216 1.35e-56 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste4g01023 PK_Tyr_Ser-Thr 1.1e-35 CL0016