Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01020 TAATCATCGTCATTCATCCGGGCATGTCAATTGGTATCAGTGTCACCTTCCAAAATTCAACGATTCCGTTCCGTTCTCTTTTTTCTTCCTCGAAACCCTAATCAGCTCCTTCACTGTCTCTGCACATCCTCCTATTCCACTTTTGCTTCCACCAGAAAGATACTGTAGGGTCTGGGCTATCTAATGATAAGATTTCCAATTTCTACATAAGTTGCCATTGATCCTTCTTTAATTAAATGGATTCAGTGCCTGCTGATGTGTCTGATTCACATCCTATTAAAGATCCACCCACTTCATCTCTTGCCAAAGAGACAGATGGGCAAGCTTCTGCTGCTGTAGTCCCTGGGCAAGATAATTCTCCACATGAGGCACCATCTAAGATATCTCCAACTGCCATATCATCTTGGGCCAAAAACTTGAAAATTTCTCAGCCATTTTCTGGTTCCCAAGACGACTCTGCAAGTGGAAATGTTGGGAAATCAACTTTTGCACGCATCACTAGTAACCTTGGATTGAGGTTGTCTCCTAAATCTCCTGTTGCAGATGAAAGTTCCAATGCAACAGCTGTACAATCTAATTTGTTTGGAACTATTACAAAAGGCCTGGTTGACTCTTCTAAGAATGCAGTGAAAGCTGTGCAGGTGAAGGCACGCCATGTTGTTTCACAGAATAAGCGCAGATATCAGGAAGGAGGCTTTGATTTAGATATGACATATATCACCGAAAACATTATTGCAATGGGGTTCCCTGCTGGTGACATGAGCTCGGGGTTTTTCGGCTACGTTGAAGGGTTTTACAGAAACCATATGGAAGAAGTGATTAAATTTTTTGAAACTCACCATCAGTCCATTGTCCTCTGTCCTGGATTCCAGGGTAAATACAAAGTTTATAATCTGTGTTCTGAGCGATTGTATGATGCATCGTTGTTTGAGGGGAAGGTGGCTAGCTTCCCATTTGATGACCACAATTGTCCACCAATTCAACTGATTATATCATTCTGTCAAAGTGCTTACTCATGGTTGAAAGAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAGGCTGGAATGGCAAGGACAGGGTTGATGATCAGTAGTCTTCTATTATTCTTAAAGTTCTTCCCAACTGCTGAGGAATCAATGGATTACTATAATCAGAAAAGATGTGTTGATGGAAAGGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGAGTCTTGACTTACTTCAATGGCGAAAACCCACCTGCCCGCAGGTGCATGCTTAGGGGATTCCGGCTTCACAGATGCCCTTACTGGATTAGGCCCTCTATAACCGTTTCAGATCATAGAGGTATGCTTGAGATTCGTGCACTAAAATTTCCCTAA 1379 0.4199 MDSVPADVSDSHPIKDPPTSSLAKETDGQASAAVVPGQDNSPHEAPSKISPTAISSWAKNLKISQPFSGSQDDSASGNVGKSTFARITSNLGLRLSPKSPVADESSNATAVQSNLFGTITKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHQSIVLCPGFQGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLIISFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHRGMLEIRALKFP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01020 380 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 369 - -
Pste4g01020 380 ProSiteProfiles Phosphatase tensin-type domain profile. 147 335 IPR029023 -
Pste4g01020 380 ProSitePatterns Tyrosine specific protein phosphatases active site. 272 282 IPR016130 GO:0016311|GO:0016791
Pste4g01020 380 Gene3D Protein tyrosine phosphatase superfamily 132 338 IPR029021 -
Pste4g01020 380 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 249 309 IPR000387 GO:0016311|GO:0016791
Pste4g01020 380 CDD PTP_PTEN 157 330 IPR045101 GO:0016791
Pste4g01020 380 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 337 IPR029021 -
Pste4g01020 380 MobiDBLite consensus disorder prediction 1 50 - -
Pste4g01020 380 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 132 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01020 Pste-Chr4 7887817 7894742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01020 33 372 Protein tyrosine phosphatase (PTP) family AT3G19420 77.259 0.0 569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01020 4 7887817 7894742 Pste4g01020 4 7887817 7894742 ECH
Pste1g02257 1 7632089 7641854 Pste4g01020 4 7887817 7894742 PCT