Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01010 ATGGAGTGCAACAAAGACGAGGCTTTGAGGGCCAGGCTAATTGCCGAAGCTAGAATGCAAAGAGGTGAATTTGCTGAGGCACTCAAGTTTGCTACCAAGGCCAAAACTCTGTACGCTGATCTTGAAAACATTTTCCAGATTCTTACTGTTTGTGAGGTTCATATTGCTGCGCAGAAAATGCTTGATGCCTCTACCATGGACTGGTATGCAATTCTTCAGATTGAAAGGTTCGCTGATGAAGCTACCCTCAAGAAACAGTACAGGAGGCTTGCACTGCTACTTCATCCTGATAAGAATAAATTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGCGTCTTGAGTGACCCAGCAAAACGTTCTTCCTTCGACATCAAGTTTAGAACCTCTGTGAGAGGTGCGGTAGCTAAGACCTCGCACCATTCCTCAAATGGGAATGTGTTTGCCCCAAAACAAGAGGCCTATGCAACAAAGAAGAATTCTAAAGCACACCATTACTCAAATGGGAATGCTTTTACTGCTAATGCAACAAATTATCAGCAGAATTCTCGTCCGAACCCCACTGCTTTCAACAACCAAGCCAGACAGATGACATTTTGGACATCTTGCCGACATTGTAATACTAAGCACCAGTTTTTCATCCAATTTGTAAATGCAGCCTTACGATGTCCACAGTGTTCGAATCCATTTAAAGCTCACGTTATAAGTGTCTCACCGTCAATGTTTACTTCAGCAAATACTTCAGCAAATATCCAGAAAGAGGCTCAAATGCATGGTCGTCCCAAACCAACCTCAGAAAGCACTGGTGGAAAACCCGCTGATGGAGAACATGCTGGTATGTTTGCACGGTCAAATCCTATGTGTGCTGCTGGAGTTGGTACACATTGTAAAGGTGAAAAAAGTAAAGATGACTGTATTCCTGCGTCCAAAGACATGGAGTCACAAGCCTCTAAAAATATTGGAAGTAAAAGAGTAAGGCAGACAGCACCAGATTCAGGAGAAAGTTTCAAAGATAGAAAGCCTGATGGGATGAACGATGCTGATGTTCGAGAAAATGATGGTGATCCTTCAAGAGTTTGTGCAAGGAGATCTTCCAGAAAAAAGCAGCGTGTTTCATATGTAGAAAACTCTGAAGATGAAGATTTTGGAACTCCTTCAAAAAGGTCACAACAAAATGGATCATTTAATTCCGATGAAGTTGAGAAACAGAACGTGCCTGCAAATGGGGGATTGTTCAATGACAATGCTGGTGTGTCTGATCAGAACAGAGAAAAGATATCCGAGTCGGATATTGGTATTAAAAGGTCGAAAGAGGATAATCCATATTCCAATGTTCCTTCTGGTCCAGAGATCTTTCACTGTCCTGATACTGATTTCAATGATTTTGAGAAGGATAAGGAGGAGGATTGTTTTGCTGTTAATCAGTTGTGGGCGATTTATGATAGTACTGATGCGATGCCAAGATTTTATGCTCTTGTCAAGAAAATAGCTTCCCCCTTCAAGTTGCAAATTACTTGGTTGGAACCTGACCCAGATGATCAAGATGAGATTGATTGGGAGGATGCAGATTTGCCTATTGCTTGTGGTAAGTTCAGACTTGGTGGTTCTCAGAAAATTACGGATCGTACTATGTTCTCTCATCAAGTGCGATGCATGAAAGGAAATGGCAAAAATTCTTATCTGGTATATCCTAATAAGGGAGAAACTTGGGCAATTTTCAGAGATTGGGATATCAAATGGAGTTCTAATCCAGAAAAACATTCAGAATATGACTTAGAATATGTGGAAATCCTATCAGATTTTTCTTGCACTGTTGGCATTGAAGTTGCTTATCTGGGCAAAGTGAAGGGATATGTTAGCCTCTTTCAGAAAGCTGACAAGAATGGAGTTAACAAGTTTTATGTCCGGCCTAATGAACTATACAGGTTCTCACATCGAATTCCTTCTTATAAGTTGACAGGTAATGAAAGGGTGGGTATTCCAGGAGGATCTTTTGAACTTGATCCTGCTGCCCTGCCTACTAATCTCTTTGAAGTTGGTGATTCTAGTAATGTGAAGATGGTGAATGGAGTAAAAACACTGGATTGA 2100 0.4129 MECNKDEALRARLIAEARMQRGEFAEALKFATKAKTLYADLENIFQILTVCEVHIAAQKMLDASTMDWYAILQIERFADEATLKKQYRRLALLLHPDKNKFAGAEAAFKLIGQANGVLSDPAKRSSFDIKFRTSVRGAVAKTSHHSSNGNVFAPKQEAYATKKNSKAHHYSNGNAFTANATNYQQNSRPNPTAFNNQARQMTFWTSCRHCNTKHQFFIQFVNAALRCPQCSNPFKAHVISVSPSMFTSANTSANIQKEAQMHGRPKPTSESTGGKPADGEHAGMFARSNPMCAAGVGTHCKGEKSKDDCIPASKDMESQASKNIGSKRVRQTAPDSGESFKDRKPDGMNDADVRENDGDPSRVCARRSSRKKQRVSYVENSEDEDFGTPSKRSQQNGSFNSDEVEKQNVPANGGLFNDNAGVSDQNREKISESDIGIKRSKEDNPYSNVPSGPEIFHCPDTDFNDFEKDKEEDCFAVNQLWAIYDSTDAMPRFYALVKKIASPFKLQITWLEPDPDDQDEIDWEDADLPIACGKFRLGGSQKITDRTMFSHQVRCMKGNGKNSYLVYPNKGETWAIFRDWDIKWSSNPEKHSEYDLEYVEILSDFSCTVGIEVAYLGKVKGYVSLFQKADKNGVNKFYVRPNELYRFSHRIPSYKLTGNERVGIPGGSFELDPAALPTNLFEVGDSSNVKMVNGVKTLD 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01010 699 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pste4g01010 699 MobiDBLite consensus disorder prediction 316 333 - -
Pste4g01010 699 MobiDBLite consensus disorder prediction 334 389 - -
Pste4g01010 699 MobiDBLite consensus disorder prediction 303 454 - -
Pste4g01010 699 Pfam DnaJ domain 67 128 IPR001623 -
Pste4g01010 699 MobiDBLite consensus disorder prediction 255 285 - -
Pste4g01010 699 Pfam Domain of unknown function (DUF3444) 454 660 IPR024593 -
Pste4g01010 699 MobiDBLite consensus disorder prediction 390 424 - -
Pste4g01010 699 MobiDBLite consensus disorder prediction 425 441 - -
Pste4g01010 699 CDD DnaJ 67 120 IPR001623 -
Pste4g01010 699 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pste4g01010 699 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pste4g01010 699 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pste4g01010 699 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 685 - -
Pste4g01010 699 Gene3D DnaJ domain 53 151 IPR036869 -
Pste4g01010 699 SMART dnaj_3 66 123 IPR001623 -
Pste4g01010 699 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01010 Pste-Chr4 7816222 7818321 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01010 47 243 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 28.643 1.44e-19 90.5