Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01003 ATGGAGTGCAACAAGGACGAGGCCCTGAGGGCTAGGCAAATTGCTGAAGCTAGAATGCAAAAAGGTGAATTTGTGGATGCACTCAAGTTTGCTAACAAAGCCAAAAAACTGTACCCTCTTGTTGAAAGCATTACTCAGATTCTTACCATTTGTGAGGTTCACAATGCTGCGCAGAAAAAACTCTCCACTTCTCACATGGACTGGTACGCTATTCTTCAAATTGAAAGGTTGGCTGACGAAGCAACCGTGAAGAAACAGTACAGGAAGCTTGCACTGCTACTTCATCCTGATAAGAATAAGTTTGCTGGTGCTGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAACGGGGTTCTGAGTGACCAAGAAAAACGTTCTTCATATGACAAGTTGGGAGCTTCTAATTCTAATTCACACCATAACTCAAATGTGAATGTGTTTGCTGCAAAATATGATGCAAATGCAACAAATCAGAAGAATTCTTATCCAAACTCTACTGGTTTCAACAACCAAGCTGGACAGATGACATTCTGGACATCTTGCCCACAGTGTAATACTAAGTACCAGTACAGCATGCTTCCTTTTAATCCAACTGTATTCTGTCAGCAGTGTTTGAAGTCATTTGAAGCTCGTGTTATTAGTTCTGGTTACCAGGGTGTCTCACCATCAATGCAGAATGAGGCTCAAATGCATGGCCCCCCAAAATCTGCCTCAGAAAGCACGGGTGGAAAAAGCCTTGGTAGAGAATATGCTGGTACATTTGTGCAGCCAAATCCCATGCCTATGAAAAGATGTGCTGCTGGAGTCAGTGCTCATCATGAAGGAGAAAAGAATAAAGATGGCTGTGTTCCTGCATCCAAAGGCATGAAGTCACAAACCTCTAAAAAGGTTGGAAGTAAAAAAGGAAGGCGGTCAGCACCAGATTCCAGCGAAAGTTTCGAAGCTAGCAGTGGTGATGATCCTTCAAGACCGAATTCAAATGCAAATGGGAATGGGAATGTGTTTGCCTCAAAACATAATGCAAATGGACAAAATTATCAGAAGAATACTTCTGTTTCACACCAGTACCCAACTGGGGATGTGTTGACTGCAAAACATGATGCAAAAGCAACAGAATATCGGAAGAGTTCTGATTTGAATATGACTGGTTTTAACCACCAAGCTGGACAGAAGACATTCTGGACATCTTGCCAACATTGTAATGCTAAGTTCCAGTTCTGCATCCCATTCGTAAATGCAACCTTACGCTGTACCAAGTGTTCTAAGACCTTTAAAGCTCGAGCTATTCCTCCAGTAAATATCCAGAAAGAGGCTTCAGTGCATGGTCCCTCAAAATCAGCCTCAGAAAGCATTGGTGGAAAACCCCTTAGTGGAGAACATGCTGGTACATTTGCACGGTCAAATCCTGTGTCGATGAAAAAATGTGTTTCTGGAGTTGGTGCATCCAGAGGCCCACAGGCCTCTCAAAATGTTGGAAGTAAAGAGTAA 1485 0.4283 MECNKDEALRARQIAEARMQKGEFVDALKFANKAKKLYPLVESITQILTICEVHNAAQKKLSTSHMDWYAILQIERLADEATVKKQYRKLALLLHPDKNKFAGAEAAFKLIGQANGVLSDQEKRSSYDKLGASNSNSHHNSNVNVFAAKYDANATNQKNSYPNSTGFNNQAGQMTFWTSCPQCNTKYQYSMLPFNPTVFCQQCLKSFEARVISSGYQGVSPSMQNEAQMHGPPKSASESTGGKSLGREYAGTFVQPNPMPMKRCAAGVSAHHEGEKNKDGCVPASKGMKSQTSKKVGSKKGRRSAPDSSESFEASSGDDPSRPNSNANGNGNVFASKHNANGQNYQKNTSVSHQYPTGDVLTAKHDAKATEYRKSSDLNMTGFNHQAGQKTFWTSCQHCNAKFQFCIPFVNATLRCTKCSKTFKARAIPPVNIQKEASVHGPSKSASESIGGKPLSGEHAGTFARSNPVSMKKCVSGVGASRGPQASQNVGSKE 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01003 494 Gene3D DnaJ domain 64 178 IPR036869 -
Pste4g01003 494 SUPERFAMILY Chaperone J-domain 62 135 IPR036869 -
Pste4g01003 494 PRINTS DnaJ domain signature 123 142 IPR001623 -
Pste4g01003 494 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pste4g01003 494 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pste4g01003 494 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pste4g01003 494 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pste4g01003 494 PANTHER BNAC03G44070D PROTEIN 298 440 - -
Pste4g01003 494 MobiDBLite consensus disorder prediction 308 356 - -
Pste4g01003 494 CDD DnaJ 67 120 IPR001623 -
Pste4g01003 494 SMART dnaj_3 66 123 IPR001623 -
Pste4g01003 494 MobiDBLite consensus disorder prediction 222 242 - -
Pste4g01003 494 MobiDBLite consensus disorder prediction 268 282 - -
Pste4g01003 494 Pfam DnaJ domain 67 128 IPR001623 -
Pste4g01003 494 MobiDBLite consensus disorder prediction 222 356 - -
Pste4g01003 494 MobiDBLite consensus disorder prediction 435 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01003 Pste-Chr4 7767271 7768841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01003 4 212 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.178 1.20e-27 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01003 4 7767271 7768841 Pste4g01003 4 7767271 7768841 ECH
Pste5g03195 5 25014927 25018312 Pste4g01003 4 7767271 7768841 PCT