Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00988 ATGGCGGGTTTTGGCGGGAAAAAGGTGCACCAAATGATCGTCGGTTTCGGCGGCAGCGGCCTCGGCCAGGTCGTCATTGCCGTAGCCGTCTCCTTACTCGTCCGCATCTTCTCCGCTCCCGGCCCCGTCCTCTCGCCGGAAAACGACGCTGACGATGTGCCGGAGAACGATTCCGACAACGCGGAAGCTCCGACCTCGGGCAAGGTCACGCCGGTTACAATCCACTGGAGAAACATCAATTGCTCCCTTTCCGATAAATTCTCCAAGTCCGTGAGATTTCTGCTTAAGAATGTGAGTGGTGAAGCAAGGCCTGGACGGTTATTAGCCATAATGGGACCTTCAGGTTCTGGAAAGACAACGTTGCTTAATGTTCTTGCGGGTCAGCTCACAGCATCTCCTCGGTTGCATTTGAGTGGCATTTTGGAGTTCAATGGAAAGCCGAGTTCTAAAAATGTTTACAAGTTTGCGTACGTGAGACAGGAGGATCTCTTTTTCTCGCAGCTCACTGTGCGGGAGACGTTGTCTCTTCCTACAGAACTTCAGCTTCCCAACATATCTTCTGCAGAAGAGAGGGATGAATTTGTGAACAATCTCCTTTTCAAACTAGGCTTGGTCAGTTGTGCTGATACCAATGTCGGTGATGCAAAGGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCCTTGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTTCAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTGCACAAGATGGTCATACTGTAATTTGTTCTATACATCAGCCAAGGGGTTCTGTGTATAGTAAATTTGATGACATCATCTTGCTAACAGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAACCACTGGCATACTTCTCCAAATTTGGGTACCAGTGCCCAGATCATACAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGATTACAGTTCTGCTGATAGTGTCTATACCTCTCAAAAAAGGATTGATGGTCTTGTTGAGTCATTCTCGCAAAGACTATCTGCAGTTATTTATGCAACTCCAATTACTACAGATGATTTCTCGAAAAGTAGAAAGCAAATCAGCCAGAGGACTGTAACAAAGAAGAAAGGAGTTTGGTGGAAGCAGTTTTGGTTGCTCCTTAAAAGAGCATGGATGCAGGCTTCCCGTGATGCACCAACAAACAAAGTTCGGGCGAGGATGTCAATTGCATCGGCAATTATCTTTGGGTCAGTATTTTGGAGAATGGGAAATTCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTTGTGATGTACTTGGATGCTGTATGCTTGTTTCTCATATTGGCTTGCTCCTAAAATAG 1416 0.459 MAGFGGKKVHQMIVGFGGSGLGQVVIAVAVSLLVRIFSAPGPVLSPENDADDVPENDSDNAEAPTSGKVTPVTIHWRNINCSLSDKFSKSVRFLLKNVSGEARPGRLLAIMGPSGSGKTTLLNVLAGQLTASPRLHLSGILEFNGKPSSKNVYKFAYVRQEDLFFSQLTVRETLSLPTELQLPNISSAEERDEFVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIILLTEGSLVYAGPARDEPLAYFSKFGYQCPDHTNPAEFLADLISIDYSSADSVYTSQKRIDGLVESFSQRLSAVIYATPITTDDFSKSRKQISQRTVTKKKGVWWKQFWLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVCDVLGCCMLVSHIGLLLK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00988 471 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 62 460 - -
Pste4g00988 471 Pfam ABC-2 type transporter 277 335 IPR043926 GO:0140359
Pste4g00988 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 306 IPR027417 -
Pste4g00988 471 FunFam ABC transporter G family member 7 72 310 - -
Pste4g00988 471 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 320 IPR003439 GO:0005524
Pste4g00988 471 SMART AAA_5 104 297 IPR003593 GO:0016887
Pste4g00988 471 Pfam ABC transporter 95 247 IPR003439 GO:0005524
Pste4g00988 471 CDD ABCG_EPDR 71 302 - -
Pste4g00988 471 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Pste4g00988 471 MobiDBLite consensus disorder prediction 45 67 - -
Pste4g00988 471 Pfam ABC-2 type transporter 397 451 IPR013525 GO:0016020|GO:0140359
Pste4g00988 471 Gene3D - 65 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00988 Pste-Chr4 7689157 7693074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00988 94 302 Calmodulin-binding Proteins AT2G36910 27.700 3.20e-10 60.8