Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00914 CTGAAAATTTAAGAGAAAAGGAATATCTGAAAATCAGGGAAAGAGATTCCAATTGAAAAGCGACTTCAATTTTGTTCTCAGCTGCTTTCATGAGTGAGAGAGTGAAGAAAGAAAAGCAAACGGGGGAGAAAAGGGAGAGGATGAAGAACATCTTCAAGAAGCTTCACATAGGTGGCAACCACGATCCGCATCGATCCAATGAGATTTCCCCACCCGTGCCGTCGCCCTCCTGCGCCGCCGATCACTCTCAAAGCTCCGCCGCCACTCCGCCCAGTCCCTCCTCCTCGTCTCCATCCACTGTGCTCCTCACTCCCCCCGCCGCCGCCGCCGCCGCCGCTCCCGCTGTCAATCGGCAGGACTTTTTCTCGTCCGAGGAGGAGTTCCAGGTGCAGCTAGCCCTAGCTATCAGCGCTTCCAATTCGGAGTTCCGTGATGATCCTGAGAAAGATCAGATCCATACGGCGAAGCTGTTGAGCTTGGGAGGCCATCGAATCGATGCCACAATGAACAAGGAGGATGTCGCCGAGGCGCTGTCCAGGCAGTACTGGGAATATAACGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATACGGTCCAAATAATGATTTGGCAATGCAAGGAAAGATGCCGTCTCGAACAGATCTTGAAGCAAATCCTGGAGGTTCTGAGGTGGTCATTGTTAATCGAACAATTGATCTTGCTCTGGAAGAACTGATACAAGTTGCACAATGCATCGCGATAGACTGCCCTGTCACCAGTTTGGTACAAAGGCTTGCTGAACTTGTTACAAGTCATATGGGTGGACCTGTAAAGGATGCTAGTATTATGTTAGCAAGATGGACAGAAACAAGAGCAGAGTTAAGGACGTCTCTTCACACAATCGTATTGCCACTAGGGTCCTTGAATATTGGGCTCTCTAGGCATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAATATGCCTTGTAGACTGGTGAAAGGTAGTCACTACACTGGTGTGGAGGATGATGCTGTCAACATCATAAAGTTGGAGGGTGAAAGGTTAAGGCTTTTACATCTTTGGTCTGGTATTGATATCTCCTACTCTGCTTTCAGGGAGTTTTTGGTTGATCTTATGGCTGCTCCAGGGACTCTTATCCCAGCTGATATTTTAAGCACCAAGGACAGTGCCTTTAAGTCTTACAATCCCAAGATTTTGCCAAGTTTACCTTCCACTCAGAATACTGAATTTTCTTATTCAAGACCTATCCCACCATCTCATGGTGAAGGCAGCAGTCAAAATTCTGTGATAAAAGATTATTCACCACCCTGGAATGAAAAATCATATTTTGAGAAGTCAGAGCCTTCGAACTTGGGTTTGAACAGGGACACTGGTGTAGGTCCTTCTAAAATTCCTAATAGAGGGACTCCTAACCAACTAGAAAATTTGCCTGCCTCGTCTGGTACTTCTTTGTACAAAGGGACTCTTGGAATGAATACAGTTGGCAATGGGACAAGATTGAATGTCAATGTTGTACCGTACACTCAGAATAGCCCCAATGACTCTCGGAGCCTATTTGCAGATCTTAACCCATTCCAATTAAAAGGAATGGGGAAGGCACCTAAACCTGTGGAAAATAAACCTCCTGAGTTTAAAAGTACTACAAACAGTACTGTCTCTGGTCGACCCCCGGTGCCACTGATGTGGAAGAATCGTCATGCTTACAATGAAGACCCCAGGAAAACTAATAAAAACCCTAATGAATACAACCCTCCCTTATTTGTTTCTAATGGTTCTTCTACGTCTGAAAATATTGATCTTAGTAGTTCCAAACCATTATATAATAATTCAAATATGAACAATGATGTAAATGCCCCAATTTTGGCACGAGCTACTGGTTCAGTTTCACCATCTGTTGTCCCTGAACTGAACCAGATTGAAGATCTCAATGCTGATTTTAAGCAAGGGGGTTTGGAAGATTCTCAATATGTCACGGTAGGAGCGGTTAGAGAACCTGAAAGTTTTGAAAGCAGAAATCTTGATCAGAGGAAGTGTACATATGATAGGTTCATTGGAAGCAACTTGAAATTAAAAGATCCAGAGAGTCCTAGTTCATCAATTGATCCCATCACAAACAGGGTTGATCAAATATTGGATGATGTAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTTATTGGTGTAAGGATTGGTATAGGTTCATATGGTGAGGTATACCACGCAGACTGGAATGGAACAGAGGTTGCCGTGAAGAAATTTTTGGATCAAGATTTTTCAGGCGCTGCATTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCAAATCTCTCAATCATTTCAGAGTATCTACCAAGAGGAAGCTTGTACCGTATTCTTCATCGCCCTAATTGTCTGATCGATGAGAAACAAAGAATAAAAATGGCTCTGGATGTGGCTAAGGGAATGAATTGCTTACACTCCAGCATACCTACAATTGTTCACCGAGATCTGAAGTCTCCTAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGTGATTTTGGGTTGTCGCGGTTGAAGCACAACACTTTTTTGTCATCCAAATCAACTGCTGGAACGGTGAGAAATTTGAGAAAATCTGTATTATTTTGTAACCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAACCCTCAAATGAGAAGTGAGTTATGCGATGTTTATAGTTTTGGAGTTATCCTGTGGGAGCTTGCCACTCTAAGGTTGCCGTGGACTGGAATGAATCCTATGCAAGTTGTTGGTGCTGTTGGTTTCCAAAACCGCAGACTTGATATTCCTAAGGAAGTCGATCCTATAGTTGCAAGAATAATCTGGGAGTGTTGGCAACAGGATCCAAATTTGCGGCCCTCGTTTGTGCAACTCACAGCGGCTCTAAAGCCACTGCAGCGTCTGGTTATCCCATCTCATCATGACCAGGTAGCTCCACCGATTGCGCAGGAGATTTCTGTAAATTCCAACCCATGAAATGTCTCGATTTAAGTGTGAATAAGTAGGCATTCCGCATAGTTATATGCGTATAAATGTAACAAGAACACAATAAAATGGAAAAAAAAAAATTATATCAAAACATGTATCGGCAAATGCTTGTGTTGAGGAAAATATCAACTGCTACTGCAGCCAAACAACTGCAGATCCATTTTGTATTTGTTGTGATAGCTTGTCCGAGGAACCAAAACTCGGTAATATGTAAATTACTGTACTTCACAAGCTGGAATATATCAAAACACTATTGTTAAATTTACCTTTTACCAGGAATGTCTAGATTTTTTTCCAAGCAGTGTGACGAAGTTCGTATA 3418 0.428 MSERVKKEKQTGEKRERMKNIFKKLHIGGNHDPHRSNEISPPVPSPSCAADHSQSSAATPPSPSSSSPSTVLLTPPAAAAAAAPAVNRQDFFSSEEEFQVQLALAISASNSEFRDDPEKDQIHTAKLLSLGGHRIDATMNKEDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGPNNDLAMQGKMPSRTDLEANPGGSEVVIVNRTIDLALEELIQVAQCIAIDCPVTSLVQRLAELVTSHMGGPVKDASIMLARWTETRAELRTSLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEGERLRLLHLWSGIDISYSAFREFLVDLMAAPGTLIPADILSTKDSAFKSYNPKILPSLPSTQNTEFSYSRPIPPSHGEGSSQNSVIKDYSPPWNEKSYFEKSEPSNLGLNRDTGVGPSKIPNRGTPNQLENLPASSGTSLYKGTLGMNTVGNGTRLNVNVVPYTQNSPNDSRSLFADLNPFQLKGMGKAPKPVENKPPEFKSTTNSTVSGRPPVPLMWKNRHAYNEDPRKTNKNPNEYNPPLFVSNGSSTSENIDLSSSKPLYNNSNMNNDVNAPILARATGSVSPSVVPELNQIEDLNADFKQGGLEDSQYVTVGAVREPESFESRNLDQRKCTYDRFIGSNLKLKDPESPSSSIDPITNRVDQILDDVDVGECEIPWEDLVIGVRIGIGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEYLPRGSLYRILHRPNCLIDEKQRIKMALDVAKGMNCLHSSIPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTVRNLRKSVLFCNRNGWLLKFSAMNPQMRSELCDVYSFGVILWELATLRLPWTGMNPMQVVGAVGFQNRRLDIPKEVDPIVARIIWECWQQDPNLRPSFVQLTAALKPLQRLVIPSHHDQVAPPIAQEISVNSNP 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00914 998 CDD STKc_MAP3K-like 709 969 - -
Pste4g00914 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Pste4g00914 998 MobiDBLite consensus disorder prediction 1 33 - -
Pste4g00914 998 Pfam Protein tyrosine and serine/threonine kinase 705 968 IPR001245 GO:0004672|GO:0006468
Pste4g00914 998 MobiDBLite consensus disorder prediction 421 457 - -
Pste4g00914 998 Pfam Ethylene-responsive protein kinase Le-CTR1 145 356 - -
Pste4g00914 998 ProSitePatterns Protein kinases ATP-binding region signature. 709 731 IPR017441 GO:0005524
Pste4g00914 998 Gene3D Phosphorylase Kinase; domain 1 696 780 - -
Pste4g00914 998 MobiDBLite consensus disorder prediction 41 72 - -
Pste4g00914 998 Gene3D Transferase(Phosphotransferase) domain 1 782 978 - -
Pste4g00914 998 SMART serkin_6 703 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00914 998 MobiDBLite consensus disorder prediction 441 457 - -
Pste4g00914 998 MobiDBLite consensus disorder prediction 508 587 - -
Pste4g00914 998 FunFam Serine/threonine-protein kinase isoform 1 694 781 - -
Pste4g00914 998 MobiDBLite consensus disorder prediction 555 587 - -
Pste4g00914 998 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 89 973 - -
Pste4g00914 998 SUPERFAMILY Protein kinase-like (PK-like) 693 987 IPR011009 -
Pste4g00914 998 MobiDBLite consensus disorder prediction 1 72 - -
Pste4g00914 998 ProSiteProfiles Protein kinase domain profile. 703 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00914 998 MobiDBLite consensus disorder prediction 382 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00914 Pste-Chr4 7095751 7105003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00914 18 953 MAP Kinase Kinase Kinase AT1G08720 52.484 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pste4g00914 PK_Tyr_Ser-Thr 1.9e-52 CL0016