Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00881 ATGCTTTCCCCATTGTTTTCTTGGATCTTATCGCCCTCATCTTCCTCCTCCTCCTCTTCTGCAGAAGAGGAAGAAATCCTTGACATTAACCATGAAAATGACCAAAACTTGAATGTAAAAGATGATGATAATGACCATTTTCTCAGCTCATGCGACGTGGATGACGCCATTCCCGTTGCACTTGCCATTCCCAATGTCCCCCCCACCGTGACTGTGGCCTTCCCCGTTGATGATGAAAGAAGAACCATCCCAGCCACCGCCACCACTGTAGTAACACGCTCAAAAGGACAGCGCAGCACCAAATATACAGGCATCATGAGACAGTATCAGAGGCTGTGGACCAAGGAGGATGAGATGGAACTGTTGAAGGGTTACCTTGATTACATCAAGCAGCATAGAAGGGCAACCACCACCCTCCAAAACGACGTAGCCTCATTGTATGATCACGTCAGACCCAAACTTAACGTGGATTTCAACAAGAACCAGCTTGTTGAGAAGCTGCGCAGGTTAAAGAGAAAACACAAGTTGGCTTTGGACAGAGGCAAAGACAAGGAGGTTCCCTTTAGGAACCCCAACGATCAGGCTGTTTTCCAAATTTCCCACAGGATTTGGGGCAATGACACGTACAATATAATAGACCAAGATGCTTTGGAAGTTGATGAGTCAGGACACACTCCTGAAAGTCATGATCTTGTTGGCAACATCAATGTCAAGATTGAACAAGTTGACAACAGTGATGAAAATGAAATAGACTATAGAGTGGCAAAGCGGTTGCGGCTAGAAGCAGATGATGGGAGCAGAACAATTGACCAGAATAATGGGGATCGCATACAGGGATTCATTGAGGAGACCATGAAGTCCTGTTTCTCACCATTACTGAACGATGTGTCAGATGAAGCACAGGAAGAGCCACTTTCTGCATTGGTGCCAATCTCAATGTCGATATGCCCAGGGGAAGTGGACCATGAACAATGGAAAAAACACAGGATTTTAGAGCTAGAGGTGTATCTCAAGCGGTTGGAGTTGTTGCAGGATCAAATCAAGGCTAGATTGGAGGAGTTGCGATCTAGCTGA 1074 0.459 MLSPLFSWILSPSSSSSSSSAEEEEILDINHENDQNLNVKDDDNDHFLSSCDVDDAIPVALAIPNVPPTVTVAFPVDDERRTIPATATTVVTRSKGQRSTKYTGIMRQYQRLWTKEDEMELLKGYLDYIKQHRRATTTLQNDVASLYDHVRPKLNVDFNKNQLVEKLRRLKRKHKLALDRGKDKEVPFRNPNDQAVFQISHRIWGNDTYNIIDQDALEVDESGHTPESHDLVGNINVKIEQVDNSDENEIDYRVAKRLRLEADDGSRTIDQNNGDRIQGFIEETMKSCFSPLLNDVSDEAQEEPLSALVPISMSICPGEVDHEQWKKHRILELEVYLKRLELLQDQIKARLEELRSS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00881 357 Coils Coil 160 180 - -
Pste4g00881 357 PANTHER BNAANNG10740D PROTEIN-RELATED 14 353 IPR007592 GO:0006355
Pste4g00881 357 Pfam Protein of unknown function, DUF573 110 205 IPR007592 GO:0006355
Pste4g00881 357 Coils Coil 333 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00881 Pste-Chr4 6890490 6891563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00881 69 356 GeBP Transcription Factor Family AT5G28040 32.565 2.49e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pste4g00881 DUF573 2.2e-26 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03234 5 25510764 25511987 Pste4g00881 4 6890490 6891563 PCT