Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00876 GTATCATCCGTCCCTCCGTTGTGGTGTCGAGCTCAGGATATCAGTTGCTCCAATAGCCGGCGCAGAACAACATGGCGGACAAGGCAGTCACCATCCGAACCAGAAAATTTATGACAAACAGGCTTCTATCCAGAAAGCAATTCGTCGTTGATGTCCTTCATCCAGGGAGGGCTAATGTTTCCAAGGCTGAATTGAAAGAGAAACTCGCTAGAATGTATGACGTGAAGGATCCTAACACTGTATTTGTCTTCAAGTTCCGAACTCATTTTGGTGGTGGGAAGTCCACTGGTTTTGGTTTGATTTATGATTCAGTCGATAATGCGAAGAAATACGAGCCCAAGTACAGGCTTATTAGGAATGGACTTGATAACAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTAAAGAAGACTAAGGCTTCTGATGCTGCCAAGGCTGGAAAAAAGAAATGAGTTTCCTGTCCTGATTTTAAGGTTCTTTTGTTATTGATATTTTCTAATGAATATTTTATTTTCTTATAGCTTCCTAGAATGGGATATTTTGGTGTAAGTGTTGATTCTAGTTTAATTAATGTTCAGTTATAACTTGAAGATCAGTACTGCGTGATCAATTTTGAAAATTTAGTTGAACATGTCGTCTGCTTTCATTTTTTTGGTAGATTGTGATAATGATTTCGGATGTTGCTGGTTTCGGATGGATTGATTATTGTTACCAAAGCATTTTAAATGCGTAGTTGAAATCGCTCGGAGGAGGTATGATTGATAGTGTAGTCTACCGTTAGAAATGTTTGAAATGTCATTGGCTTTGAAGAATAACTATGTTGGACATGAATACATGTTCTTGAAATATTGTGTATGGGAGAGATAACCTAATTAATTATATGGTTGGAGTTATGATATAA 934 0.3758 MADKAVTIRTRKFMTNRLLSRKQFVVDVLHPGRANVSKAELKEKLARMYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDSVDNAKKYEPKYRLIRNGLDNKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00876 137 Coils Coil 95 115 - -
Pste4g00876 137 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pste4g00876 137 MobiDBLite consensus disorder prediction 98 137 - -
Pste4g00876 137 FunFam 40S ribosomal protein S24 1 137 - -
Pste4g00876 137 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pste4g00876 137 Pfam Ribosomal protein S24e 25 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pste4g00876 137 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Pste4g00876 137 Gene3D - 1 132 - -
Pste4g00876 137 PANTHER 40S RIBOSOMAL PROTEIN S24 1 131 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00876 Pste-Chr4 6846901 6848913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00876 1 132 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 85.606 1.96e-83 239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00876 4 6846901 6848913 Pste4g00876 4 6846901 6848913 ECH