Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00874 CCTACACATGGTAAAGCTAACGTTGGTGTTTCAATTTTTTTAGCATAAAGAAAAAAACATAAGGAATTAATTTTTGTGGCAGTTCAGTTTTGAGCATGAGTCTCGTAGGTCGTACGGACCGCGGCGTTGTTTCTCACTTAACATTTTACTTTACAGGCCAGCTCTGTCTGTGCTGGGTTTGTCGCTACGTGATTATTAATGTTTTTAGGAATATAATTAGAGATGGAACAGGTAAAGCAGAGAATGGATCGATAGATTCAATTGGTTAAAGTCATAGTTATTGTAATTTTAATGCTTAATTAGTAGACGAGTTAAAATTAAAAACAATATCAGTGATGACTGGGCACGTCTCTCTCCTTGTCTATTTGTCACGTTCCGTCATGGGTTGGGTGGCTCTGTTTGTATTGTATCCCATTCCTCTAAAAAATTGTGGCACAGACACACTTTTCCCTTCCCTTTCTGTTTAACTCTCTCCGTTTTTATTCTCTTTCTCGTGAATAATTTCATACGTTTTTTTATATTAAAAAAATATCCTCGAAAGGTTGCGGAAAAACTATTATTTTAAATTAATAAATATTATTCCCCCCTCTTCCTCTCTTTCGGCTTGTGTTCATCTGTCATAACAAAAGAGGAAGGGTATAGGAGAGAAATCCAATCATATCAGACGATGAATGGGGTCACACACCTTGAACCAGATGACTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATACAATGAAATCCTTGGTAAAGGAGCTTCAAAGACAGTATATAGAGCATTCGACGAGTATCAAGGGATCGAAGTTGCTTGGAACCAGGTCAAGCTGTATGATTTTCTGCAAAGCCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCCTGAAAACATTAAAGCACAGAAACATTATGAAGTTTTACACTTCATGGGTGGATACTGCTAATAGGAATATCAACTTCGTAACTGAAATGTTCACATCTGGTACACTTAGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCGGTGAAGCATTGGTGTAGACAGATCTTGAGCGGTCTTCTCTATCTTCATAGTCATGACCCGCCTGTGATCCATAGGGATCTAAAATGTGATAATATTTTTGTGAATGGAAACCAAGGTGAAGTGAAGATTGGGGATCTTGGTTTGGCAGCAATTCTACGGAAATCGCATGCTGCTCATTGTGTAGGGACGCCCGAGTTCATGGCCCCAGAAGTATATGAAGAGGCATATAATGAGTTAGTTGACATATATTCCTTTGGGATGTGCATATTAGAGATGGTCACATTCGAATATCCTTATAGTGAATGTACTCATCCGGCTCAAATCTATAAGAAAGTTGTTTCTGGGAAAAAGCCAGATGCTTTGTATAGAGTGAAGGATCCAGAAGTGCGGCAATTTGTTGAGAAATGCTTGGCCACAGTGTCTTTAAGGCTTTCGGCTAGGGAGCTTCTAGATGATCCATTTCTTCGAATTGATGATTACGAATATGATTTGAGAACTGTAGACAACGGGGAATTGGATGAATTTGGTCCTCTCATGAGACAACCGTTTTTTGATCTTCATCGGAGCTATAGTAACTTCAGTAATGAATATTCAAATGGCTTTGGATATGAAGGAGACTGGTGTCCTCATCCGGCTGAGATTGAACCCAGTGGAATTGAACTTTTTGAGTACCATGATGATGAACCCTCTGAAGATGTTGACATAAGCATCAAGGGCAAGAGGAAAGACGATGGTGGTATCTTTTTGAGACTAAGAATTGCTGATAAAGAAGGTCGGATCCGAAATATTTATTTCCCATTTGACATAGAGATGGACACAGCAATAAGTGTGGCAACGGAAATGGTTGCAGAACTGGACATTACTGATCAGGATGTTACCAGAATAGCAGATATGATAGATGGGGAGATTGCTTCCTTGGTACCTGAATGGAGACCAGGACCAGGAATAGATGAAACTCCCCGTTTTGCAAATCAAGGTTTCTGTCACAATTGTGTGTCTAATCATACTTCTAGCGGCTCTTTTCTGGATTTTATTTCACACAATCCAGGTAACAAGAACTTGCAACTTCTTGAGTGTTGTAGGCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAAGAGTATGACAATCATGCTAGGGGGGATATGAACATATCAAACCAAGTAGACAGCTTGCAATATCAGGAGTTATGGAATCAGCACGAAAGTCGCGAACTGAGTCCAGTAGAGTCTGATCAAAGCCATTCCGATGAGCAATATGAACAATTAGATAAATCAATGCTGGCTAATGATAAAGGACAGGATGTTTGGGGAAAGAAGGTTCCACCGAATGCAGCAAACTCTCTAAGAGATTTATCAGCAAGGCACGATTTCTCCATTATCCAATCTACCTGTTGTGACCTTGAGGGTGACTATGAGAAAGAGATCCAAAAGGAACTCAGATGGCTCAGAGCCAAGTATCAAATGGAGTTAAGGGATCATAAGGATCGACGGTTTGGCCAATCTTGGTATAATAGTAGTGACACCGAGCACAGAGCAGAAAATGGCTTTTTGTCACCTTCACTGACACAAGGAGGCAACAGTGGGACTCAGCTGAAACCCATGGCTAATAAGTGCCACCCTCATGTCCATGAAAGCAGCCCCAATTCGGACACCCAAAGGGCCCAAAATTGTGAGGCGATGGAATCCCCTAGAGAAGGTATGGTTACTGCAAAGAGTTTTTACACAGGCTCATTGCTTCCACACTCTTTGCACAGGACAGTTTCCCTCCCAGTTGATGCTGTTGATATTTAATTTTTTAGCACTCATTGGATTCTTTTGTAGATTATATATATAAATCCCCGTATAGAGGCTATCCGATTTTTACATCCCCACCTTTTTTTTAATAGGATTTTCAATTTACCCACATGGAAATCGGTAGCTACTAAGGCATCAACACACAATTGAGTGTTTATTTATCTAGGCAAAGAAAATCAGATTTTTGTTACATTGTTAATTAGTGATCGTGAATTTCATAATTGAGGCATGTAACATATTAAAGTAGTAGAGTGTATGTACATCTGTCCAAGTTTCTTATATCCCCCACGTCATGGTCATGAAAGGAGTATTGATAGACGTTATCGTGTTAGGTTGCTTGCTTTATATTTCCTTTCCTGCAATAATTGAGTATCTGAACAAGGTCAAAATCCACACTAGAACCATATGCAAGCGGGTCCCAAGTAAAGC 3289 0.3998 MNGVTHLEPDDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDALYRVKDPEVRQFVEKCLATVSLRLSARELLDDPFLRIDDYEYDLRTVDNGELDEFGPLMRQPFFDLHRSYSNFSNEYSNGFGYEGDWCPHPAEIEPSGIELFEYHDDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGFCHNCVSNHTSSGSFLDFISHNPGNKNLQLLECCRHGCASMHGRFEEITFQSEEYDNHARGDMNISNQVDSLQYQELWNQHESRELSPVESDQSHSDEQYEQLDKSMLANDKGQDVWGKKVPPNAANSLRDLSARHDFSIIQSTCCDLEGDYEKEIQKELRWLRAKYQMELRDHKDRRFGQSWYNSSDTEHRAENGFLSPSLTQGGNSGTQLKPMANKCHPHVHESSPNSDTQRAQNCEAMESPREGMVTAKSFYTGSLLPHSLHRTVSLPVDAVDI 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00874 729 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Pste4g00874 729 MobiDBLite consensus disorder prediction 643 666 - -
Pste4g00874 729 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Pste4g00874 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Pste4g00874 729 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 639 - -
Pste4g00874 729 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Pste4g00874 729 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00874 729 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Pste4g00874 729 Gene3D - 371 436 - -
Pste4g00874 729 CDD STKc_WNK 22 281 - -
Pste4g00874 729 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00874 729 FunFam probable serine/threonine-protein kinase WNK9 371 455 - -
Pste4g00874 729 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Pste4g00874 729 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674|GO:0005524
Pste4g00874 729 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00874 729 MobiDBLite consensus disorder prediction 643 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00874 Pste-Chr4 6826100 6830170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00874 127 728 MAP Kinase Kinase Kinase AT3G04910 53.810 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pste4g00874 Pkinase 2.3e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00874 4 6826100 6830170 Pste4g00874 4 6826100 6830170 ECH
Pste5g03238 5 25537730 25540800 Pste4g00874 4 6826100 6830170 PCT