Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00838 ATGGATAGGGTGTTCTCAGTGGACGAAATCTCCGAACACTTCTGGTCGGCGCCGCCGATCCCCGCCGATGAGGCTTCCAAGATGAGCCGCAGCCCCTCCGAATGGGCCTTCCAGCGCTTCCTCCAGGAGGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCATCCTCCTCCTCCTCCGTTGCCCCCGACGTCGTCTTCGTCGAGATCCACGATCAACCCAAACCCGCCCCTCCTCAAAACCCCCCTGCTCCTGTCCCCCTTGACTCCGATGAATACCAGGCCTTCCTCAAGAACCAGCTCAACCTCGCATGCGCCGCCGTTGCCTTGACTAGGGGTTCCTTGGCTAAAACTCAAGACCGTTCCTCTTTTTCTGATGCTGGATCCCAGCCGACTAATCATTCTCCTCTCGGATCTCAGACTACTCCTAAAGTGTCTATTCCTTCTGGAAATGATCCCTCTATCTTACAAGATAAAGATGCCAAAGTACCTGTTGGAATTCCTTCCATACCTTCCATGCAAAAGAAACCTGCTGTTGCAATTAGGCCATCAACAAGTGGGTCATCGAGAGACCAGTCGGACGACGATGATGCCGAGGGAGAGACATCTATGAATGACAACATGGACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTATCCAATAGGGAATCAGCCCGACGCTCTAGAAGAAGAAAGCAAGCTCATTTAACTGACCTAGAAACACAGGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGTCTTACTGATGTTAGTCAGAAATACAGTGATTCTGCTGTTGACAACAGGGTTTTAAAAGCCGATGTTGAAACATTAAGAACAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACTGGGTTGAATCCAATGCTTCATGCCATGTCTGACATATCATCATTGGGCATGCAATCTTTTGATGGAAGAAGCCCTTCAGACACTGCAGCTGATGCAGCTGTTCCTGTGCAAGATGATCCACATCATCACTTCTATCAACCCACATCTAATAATCCTATTCCCGGTCATGATCCGATAGTCAACAATGGGTTGGGGGGCATTGCTTCAATTGAAAATGTGCAGCAGAATGCTGCTGCAGTCGTAGGTGGGAACAAGATGGGTCAAACAGCTTCTCCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTGGATTCGTGTGGACCTCCATCTAATGGGGAGCAGTAATTCAGTAGATTTGCCAAGAAATTATTTCTGAACAGTTATTTCTGGTAGTTAAAACTAAAGCCTATTCTTCTGGAATACATTGTAAATCAATTTGATGGAGCACATGAAGCTGGATTCTATCAGTGCACCTGATAACTTCTGTTTTTGATTTTTTGTTATAAAAAAAGAGATAAAATAAAATTTACCTTAACTTTAA 1450 0.471 MDRVFSVDEISEHFWSAPPIPADEASKMSRSPSEWAFQRFLQEASASASASASASSSSSVAPDVVFVEIHDQPKPAPPQNPPAPVPLDSDEYQAFLKNQLNLACAAVALTRGSLAKTQDRSSFSDAGSQPTNHSPLGSQTTPKVSIPSGNDPSILQDKDAKVPVGIPSIPSMQKKPAVAIRPSTSGSSRDQSDDDDAEGETSMNDNMDPADAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKVKMAEETVKRITGLNPMLHAMSDISSLGMQSFDGRSPSDTAADAAVPVQDDPHHHFYQPTSNNPIPGHDPIVNNGLGGIASIENVQQNAAAVVGGNKMGQTASPLQRVASLEHLQKRIRGGVDSCGPPSNGEQ 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00838 417 Coils Coil 229 256 - -
Pste4g00838 417 PANTHER BASIC LEUCINE ZIPPER 63 1 407 - -
Pste4g00838 417 Coils Coil 271 291 - -
Pste4g00838 417 FunFam BZIP transcription factor 211 262 - -
Pste4g00838 417 SUPERFAMILY Leucine zipper domain 213 263 IPR046347 GO:0003700|GO:0006355
Pste4g00838 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 216 231 IPR004827 GO:0003700|GO:0006355
Pste4g00838 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 211 263 IPR004827 GO:0003700|GO:0006355
Pste4g00838 417 CDD bZIP_plant_GBF1 214 265 IPR045314 GO:0003700|GO:0006355
Pste4g00838 417 Pfam Basic leucine-zipper C terminal 280 406 IPR020983 -
Pste4g00838 417 SMART brlzneu 209 273 IPR004827 GO:0003700|GO:0006355
Pste4g00838 417 MobiDBLite consensus disorder prediction 117 152 - -
Pste4g00838 417 Pfam bZIP transcription factor 212 264 IPR004827 GO:0003700|GO:0006355
Pste4g00838 417 Gene3D - 212 267 - -
Pste4g00838 417 MobiDBLite consensus disorder prediction 117 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00838 Pste-Chr4 6480824 6483637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00838 1 302 bZIP Transcription Factor Family AT4G02640 41.945 7.89e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste4g00838 bZIP_C 6.3e-45 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00838 4 6480824 6483637 Pste4g00838 4 6480824 6483637 ECH
Pste5g03266 5 25905019 25909287 Pste4g00838 4 6480824 6483637 PCT