Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00836 CAAGTAGCAAATAGCAAATAGCAAATAGCAAATAGCAAATAGCAAATAGCAAATAGCAAATAGCAAATAGCACAGTGTGTCTTTCTTCTTACTTATTTGTGTTTTTTGTTTTATCCATTATTGGGAAGCGTAACCAAGTCCCATTCAGGGGACCAGAAGAAAACAACGCAACAAGCATCCTTGTTTTAGGCCAGAAATGTGGCAATAAAAAAGGTTGTCTTTTGGTTACAGCAAAGTTGAGAATTGAGATGGCGGGTAATAGTAGCTCGGAGGCTTTGGGGGACGATTTCTTCGAACAGATCTTAGCAGTGCCTGAAGCCCCAGTGGGAATGTTGCAACTGGGCCCCACAACTGCTTCATTCAGATCAGGCCTAATGCCTCTCCGCTTGAATTTGGAGCAAACTTCCTTTCTGAGACACCAAGATTCCACCAACTTGGTTGACCATCTTCATGCCTCTTCCTCTTCCACTGCACCACTCACCGATACAAATTCCATGCACATCAGAGGTTTGTTTTCACCCTTTCAACCCATGCATACTCCTACTCTTCCTCACTCTCTACGCCCACCACCTTCTCACCCACATCTCCATCTCCACCATAACCAACAGGGCCAGGGAGTTGCAGTTGCAGCTCCAGCGCCAATGGCTGCTACGCCACAGCCACCTGGCATCCGGCCTCGTGTGAGAGCTCGAAGAGGACAAGCAACAGATCCCCACAGCATTGCTGAGAGGTTACGCCGTGAAAGAATTGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAATAAGACGGACAGAGCAGCGATGCTAGATGAAATTGTGGATTATGTCAAGTTCCTCAGGCTCCAGGTTAAGGTCCTGAGCATGAGTAGACTGGGGGGAGCTGGTGCAGTTGCTCAGCTTGTGGCTGATGTTCCCCTTTCTGCAGTGGAGGGGGAGGACATAGAAGGTGGAGCCAATGAGCAAGCCTGGGACAAATGGTCCAATGATGGCACAGAACAACAGGTGGCCAAACTTATGGAAGAAGATGTGGGAGCAGCTATGCAGTTTCTTCAGTCCAAGGCCCTCTGTATCATGCCCATATCTCTAGCCTCTGCAATTTTTCGTATGCCTCAATCAGAAGCATCAACAATCATCAAACCTGACTCAAACAGCCACTGATATATAGAACCGAGCAAAAGTATCTTTAACAGACATTACATAACTTTATGACAAGGGTATTCTACTTTCTTGTATAATTTCCTGATTGGATGCAGAAGGATCTAGTCGGTGCAAGTGTTCAAGTTTTGTCAAACAAGGAGTAGTTGTTATTGCTAATATGTAAAACCGGAGGAGCCCAGCATGTCCTTGTCATGGTGAAGAGTAAAGATCAATCTTTTCAATGGTCTGGTTGATTTTTTTCTTCCAAATAATATCAGTGTTGGGTTGGTGGTGGATGACCAAAATATTACTAGTGGAACTTATTTTCTTTGTTTTCTATTTTTAGTCAGTGGAAAGTGGGACCACATAAAAGGAAAGGATGGGCACGCATTATGTATCTGGAGAAAACTTTAATACAAGTTGAATTAAAATAAGGTTAGTTACCTTTGTAAAGATGTTTGGAAGCATCTGACAATTGGAAAAGCTAAAGGTATTTTAAAATAATCATGC 1658 0.4373 MAGNSSSEALGDDFFEQILAVPEAPVGMLQLGPTTASFRSGLMPLRLNLEQTSFLRHQDSTNLVDHLHASSSSTAPLTDTNSMHIRGLFSPFQPMHTPTLPHSLRPPPSHPHLHLHHNQQGQGVAVAAPAPMAATPQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAVEGEDIEGGANEQAWDKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPQSEASTIIKPDSNSH 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00836 306 SMART finulus 157 206 IPR011598 GO:0046983
Pste4g00836 306 MobiDBLite consensus disorder prediction 134 155 - -
Pste4g00836 306 Pfam Helix-loop-helix DNA-binding domain 156 200 IPR011598 GO:0046983
Pste4g00836 306 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 74 285 - -
Pste4g00836 306 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Pste4g00836 306 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 210 IPR036638 GO:0046983
Pste4g00836 306 Gene3D - 146 208 IPR036638 GO:0046983
Pste4g00836 306 FunFam Basic helix-loop-helix transcription factor 146 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00836 Pste-Chr4 6469192 6474201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00836 38 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 56.410 3.46e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste4g00836 HLH 2.9e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00836 4 6469192 6474201 Pste4g00836 4 6469192 6474201 ECH