Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00833 TGAGGAGGAGAGAATCAAGTTCTTTGTATAAAGACATCCAATTTGTCGCTAGTTGGCTGTATGAGGCAAAAAATATCACTATGAAATTACTGTTTTTGTAAACAAAAGTAGGAGAAAAGGGATTCCCAGTTGACACCATCGCTCACTAAGGTGAGTGTGTGTGACTGAGAAGAGAAAGGAAAGAAGAATCTTTTGGTGACTGTCTTTCATATCTCAACTCACACCACCACTCTCTTGCTTCTTGTTTTCAAAGGGTAGGACTTTTCTTCATTGCTGTTGTGTAAAGCTTCTTCCTTTCTTCCTCTTCTGTTCATTCATCTTTGGGCTACTCTGGCCACTTTTGAGCTTCTTCTTTCATCAAATGAAGATGGGCTAATCGTGCATTTTTATACATCTTGAAGTTTGGATCGATTTAAATGTTCACGGAGACATCCTTAACGTTGCTCGAATTCTCAGTGTTAGTGAATAAATTTTACTTTTTGGTAGGCTGTATTATTAATAGTTCTATTAATAGATTCAAATGTTATCTATCAAGGATTTTCTCAAATTGTTGTTATGGTTGCCTTTTTGGTTGGACGTGTTCGAAGCATAATTTGAAGTATGCAACTACTGCCAAGGCCAGCTGAAGGGGTTCTAGTGTAGGATTTTAGATTTATCTCCCTATCTGCACTTTCTCACGAGTACTGTCAACTACTATGTGCCAAAGCGAAACCTGAATTTTTTGAAATTCTGAGGCGTAAAAAAATATATGAAACTTTTGTTGTTGGTATTTCTTATAATGTAACATTAGGTGATATTGATTCTGCTGGATTTATTAGTGTCCGGGTATAAATGACATTCAATTTGTTTTCAGATTTCTGAAATTTCGTCCTTATTATGGTTTTTTGAAGGAGTGTGAGTGAACAACTAATATAAGCCTGCTTCTGCATCTTGTACACCAAAGCTCATCATTTGGTGATCTTCAAAATGGTTTCGAGGTCATACTCTAATTTGTTAGATCTAACTTCTTGTGGCTCCCCATCTTTCGGTCGCGAGAAGAAAAGGCTTCCTCGTGTGGCAACTGTAGCTGGAGTACTGTCTGAACTGGATGATGAGACCAGCAACAGTGTTGGCTCCGAAACTCCATCCTCAGTCTCTCAAGAGAGGATGATCATTGTTGGTAACCAGCTTCCTCTAAAGGCACACAGAAAAGACAATGGTACTTGGGAGTTCACATGGGATGAAGACTCGCTTCTTTTACAGCTGAAAGATGGTCTTGGGGATGATGTAGAAACTATCTATATTGGTTGTCTTAAAGAAGAGATTGAGCCAAGTGAGCAGGATGATGTTGCACAGCACTTGCTCGACACTTTCAAATGTGTGCCAACGTTCCTCCCTCCTGAGCTTTTTAGTAAATTCTATCATGGATTCTGCAAACAACATCTATGGCCTTTGTTTCACTACATGCTTCCGCTGTCACCTGATCTTGGTGGTCGATTCGATAGGTCCCTTTGGCAAGCTTATGTTTCAGTGAACAAGATATTTGCAGATAAAGTGATGGAAGTCATTAGCCCTGATGATGACTTTGTGTGGGTTCATGACTACCATCTGATGGTACTTCCAACATTTTTGAGGAAGAGATTTAATAGGGTGAGGCTAGGATTCTTCCTCCATAGTCCATTTCCTTCCTCTGAGATATACCGAACACTTCCTGTTAGGGATGAACTTCTTAGAGCCCTTCTGAATTCTGACCTTATTGGGTTTCATACTTTTGATTATGCCAGGCACTTCCTCTCCTGTTGCAGTAGAATGCTTGGGATTTCTTACCAATCCAAGCGGGGCTACATTGGTCTTGAGTACTATGGAAGAACTGTAAGCATAAAAATTCTTCCTGTTGGCATTCATATAGGTCAGCTCCAATCAGTCATGAGTCATCCTGAGACAGAGAGCAAGGTTGCAGAGTTAAAAAATCAGTTCAGAGATCAAACTGTGATGCTTGGGGTTGATGACATGGATATATTCAAAGGGATCAGCTTGAAGCTTTTGGCGATGGAACAATTGCTTTTACAACATCCTGACAAGAGGGGCAAAGTTGTTCTGGTGCAAATTGCAAACCCAGCAAGAGGCCGTGGAAAGGATGTGCAGGAGGTACAAAGTGAAACTTATGCCACGGTGAAGAGGATAAATAATACATTTGGAAGGCCTGGATACACGCCTGTAGTCTTGATTGATACACCACTTCAGAGTTATGAGCGAATTGCTTATTATGTGATTTCAGAATGTTGCCTCGTTACTGCAGTGAGAGATGGGATGAACCTTATACCTTATGAATACATCATTTGTAGACAAGGAAGTGAGAAGATAGATGAGATTTTAGGGACTGACCCACTAACCCAAAAGAGGAGTATGCTGGTGGTGTCTGAGTTTATTGGCTGCTCCCCGTCGTTAAGTGGGGCAATTCGAGTGAATCCGTGGAACATCGATGCTGTTGCTGAAGCTATGGATTCTGCGTTGATGGTCCCAGAGGCTGAAAAGCAGATGCGGCATGAGAAGCATTATAGGTATGTTAGTACACATGATGTCGCATATTGGGCACGTAGCTTCTTGCAGGATCTGGAAAGGGCATGCAGAGATCATTTGAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGCTTTCGTGTGATTGCTTTGGATCCAAACTTTAGAAAGCTATCAGTGGAACATATTGTTTCAGCTTATAAGAGGACTAAGAACCGAGCAATTCTTTTGGATTATGATGGCACTATGGTGCAGCCTGGATCGATGAGTACAACGCCTAATGCTGAAGCTGTTGGCATCTTGAACATTTTGTGCAGAGACACCAAGAATTGTGTTTACATTGTTAGTGGAAGGGAGAGAAAGACTCTTACTGAATGGTTTTCTTCTTGTGAAAGGATGGGCATTGCTGCCGAGCATGGTTACTTTGTGAGGACAAATCAAAATGCAGAATGGGAAACGTGTGTTCCAGTACCCGATTTTGAGTGGAAACAGATTGCTGAGCCGGTTATGCAGTTGTATACGGAAACAACTGATGGTTCTAACATAGAGACCAAAGAAAGCGCTCTTGTTTGGAACTATGAGTATGCCGACCGAGACTTTGGTTCATGCCAAGCTAAGGAGCTCTTTGATCATCTGGAAAGTGTTCTTGCCAATGAGCCTGTTTCTGTTAAAAGTAGTCCAAACATAGTGGAAGTAAAACCTCAGGGTGTGAGTAAGGGCATCGTAGCAGAACGTCTTCTCTTAACAATGCAACAAAAGGGAGTGATTCCAGATTTTGTTCTATGCATTGGGGATGACAGATCAGATGAGGACATGTTTGGGGTGATAATGAATGCAAAGTCATCACTATCTCCAGTTGCAGAAGTGTTTCCTTGCACCGTTGGCCAGAAACCTAGCAAAGCCAAGTATTACTTGGAAGACACAAGTGAGATTTTGAGAATGTTGCAAGGCCTTGCCAGTGCTACTGAGCAGTCTAATAGAAGTTCTTCTCAACCTTCTCGTTAACGTTTTTATTATGTGTACCACACGCATAATATTTTGCTACAATGTACCATTTTTCTATACTATACTGGGATATCTATCTTGTGTTACATTTCGTGATCTATTTTATTTTCTGGCTGACCTGTCTTCATTTATTGATATCCCAACATTGTTGCAACTATCAATAGGTTCTTTTAAAAGTACATCATATATTGCATTTATTGCTTCTTTTCTTTTCTTTACTATTGCTTCGGACCATTTGATTTTGTATGTATTATAGCGTGATTATTGATTGGGAATGAATGAATGCTAGGATTGTGAATGTCCTCTATGGAGTAAAATTTATAGTTGGCATTGCGGGGCATGAATTCTGCTGCTGCTCTTTTCATCAGCTTTCGTCCAATGTAGAGGTTTCAGTCAGTAGAGCTTTATTATTTTTATTTTTTTTTTCCTTTAGCAATTGCTCATACAATTGAGGGTCGAAAGCTGTGGTCGTATAAATGTTTTCCTAGGTGATAAATTCAG 4026 0.4041 MVSRSYSNLLDLTSCGSPSFGREKKRLPRVATVAGVLSELDDETSNSVGSETPSSVSQERMIIVGNQLPLKAHRKDNGTWEFTWDEDSLLLQLKDGLGDDVETIYIGCLKEEIEPSEQDDVAQHLLDTFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGISYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMSHPETESKVAELKNQFRDQTVMLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGKVVLVQIANPARGRGKDVQEVQSETYATVKRINNTFGRPGYTPVVLIDTPLQSYERIAYYVISECCLVTAVRDGMNLIPYEYIICRQGSEKIDEILGTDPLTQKRSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALMVPEAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKNRAILLDYDGTMVQPGSMSTTPNAEAVGILNILCRDTKNCVYIVSGRERKTLTEWFSSCERMGIAAEHGYFVRTNQNAEWETCVPVPDFEWKQIAEPVMQLYTETTDGSNIETKESALVWNYEYADRDFGSCQAKELFDHLESVLANEPVSVKSSPNIVEVKPQGVSKGIVAERLLLTMQQKGVIPDFVLCIGDDRSDEDMFGVIMNAKSSLSPVAEVFPCTVGQKPSKAKYYLEDTSEILRMLQGLASATEQSNRSSSQPSR 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00833 852 NCBIfam trehalose-phosphatase 589 836 IPR003337 GO:0003824|GO:0005992
Pste4g00833 852 CDD HAD_TPP 592 828 - -
Pste4g00833 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 838 IPR001830 GO:0003824|GO:0005992
Pste4g00833 852 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Pste4g00833 852 Gene3D Glycogen Phosphorylase B; 53 311 - -
Pste4g00833 852 Gene3D Glycogen Phosphorylase B; 312 528 - -
Pste4g00833 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Pste4g00833 852 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 849 - -
Pste4g00833 852 Gene3D - 590 696 IPR023214 -
Pste4g00833 852 Gene3D - 716 850 IPR023214 -
Pste4g00833 852 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Pste4g00833 852 SUPERFAMILY HAD-like 591 836 IPR036412 -
Pste4g00833 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 311 - -
Pste4g00833 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Pste4g00833 852 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Pste4g00833 852 NCBIfam HAD-IIB family hydrolase 593 794 IPR006379 -
Pste4g00833 852 Pfam Trehalose-phosphatase 594 827 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00833 Pste-Chr4 6453251 6457889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00833 1 852 Trehalose Biosynthesis Gene Families AT4G17770 78.463 0.0 1436