Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00816 TAGACAACTGCTTTTCACTCAAAGATGTCAGAACCCAAGGTCAAACACGTAGGCGGCCATATCCTCACTGTGCACATGTTTTTGGTATAATCCTTCTTCAATGTTCTCCATCTCCATCAACAACCACAACCCTCCAAAATGAACCAAAACACCCTCTTCTTCTTTATCCTCAAACCCCTCTCTTCTCCCCTCATCCATTCCTACATAATCCTCTTCTATCTCCTCGCCAAAAACACCTTCTGCTATGTGGACCCCAGATTCGTGGCATGTTCACCCAAAACCTGCGCCAACGCCAACGCTTACAATAATCAAAGCATAAGCTATCCATTTTACATCCAAGGAATACAAAAACCTTTCTGTGGGTACCCTGGTTTTGGCATCTCTTGTGCCCCAGATGGTTTCCCAATCCTCAACCTTTCCAATACCAATTACATCATTCACCAGATATTCTACCACAATCAGTCCCTGCGAGTCTCCAATGCTGCGTTCCCAAACAGCAGCGGTGGTTGTTTTCATCGTACCCAGAATCTCACTCTCCCACCCACAAAAGAGTTCAGTATTGTTCCGAATCAAAGGGACATTAGATTGTTCTACGGGTGTGAGTTATCAGCTTGGGTACTGGAAGAGCACAAAAAGGGGTGTTATGGAGAAAATAATAGGAGTACAGTTATGGCAATGTATAAGGAAGAAAGCAGCAGGAATAACGTGTCAAGGAGTTGCAGGGGCGAGGTTGTGGAAACGGTGGGGGAAGATGGAATAGGGATTGAAGAGGCGTTGGAAAGAGGATTGTTGCTAAATTGGACGGCGAGTGACTGCAACGTCTGCAACAGGACTGGAGGGAGGTGCGGCTTTGATTTGGAAGCACACACTTTCAAGTGTTACTGCACTGACAGAGTTCATTCTGCCAAATGTGATGATCCTGTTACCACGATTACAAAGAAAGCAAGGTTGAGTTTGAAGGCCAAACTGGGTATAGGTTTAGGTATTGGAATCCCATGCGTGATGGTAATTGGGTTGCTGTTTCTCTTTCTACTCTACAGACGAAAACATACTACCTCCGGTGGCGGACAATTGGTGTCAAGAGATTCTTATTCTGATTCATCCTCAAATCCTCATCAAGAAAGTAGTAGCGGTTACTTTGGAGTTCCACTCTTCTCTTACGAGCAGCTTAAAGAAGCAACAAACAATTTCGACGATACTAAAGAACTTGGAGATGGAGGCTTCGGTACTGTCTACTATGGGAAACTCCCAGATGGACGGGAAGTTGCGGTAAAGCGCTTATACGAGCACAACTGGCGGCGAGTAGAACAGTTCATGAACGAAGTTAAGATCCTCACAAGATTGCGTCACAAACACCTTGTGTCACTCTATGGCTGCACTTCACGGCACAGTCGTGAACTTCTGCTTGTGTATGAATACATTTCAAACGGCACTGTTGCGTGTCATATCCACGGAGAATCAGCGAAGGCTGGCTTTCTACCTTGGTGTACACGAATGAAAATTGCCATAGAAACAGCAAGTGCATTGGCTTATCTCCACGCCTCAGACATCATTCACCGTGACGTGAAAACAAACAACATTCTCCTGGACAACAACTATTGTGTTAAGGTAGCAGATTTTGGGCTTTCAAGAGACTTCCCCAACAACGTCACACATGTCTCAACGGCTCCACAAGGGTCACCGGGTTACCTTGATCCTGAATATTACAATTGTTACCAGGTTACTAGTAAGAGTGATGTGTATAGCTTTGGGGTTGTTCTTATTGAGCTAATATCATCCAAGCCTGCGGTTGATATGAACAGAAGCAGGGATGAGATTAACTTGTCAAATCTAGCCATAAGGAAGATTCAAGAAAGTGCAATTGGAGAGCTGGTTGATCCTAGTCTTGGATTTGATTCAGATAGTGGGGTTAAGGGGATGATAGTTTCAGTGGCGGGGTTGGCTTTGCAGTGTTTGGAAAAGGAAAAGGAATTAAGACCTTCCATGTGTGAGGTGTTACATGAACTAAAGAGAATTGAGAATGCGAAGGTTGAGGTAGAGGTTCGAAACGAGGCCGATGTTCACAACGGAGTTTCACATAGTTGTGCACATTCACCACCACCTGCCTCACCTGAGTGGGATGAAGTTGGATTGTTGACAAATATGAAGCCTACTTCCCCAAACTCTGTCATTGATAAATGGGAAAGTAAATGTACTACGCCTAATATCAGTGGTTAATCACTTGTTCTATTCTTAATTGTTCAGAATCCATTTTTATCATATCAACTTTCAGTTTTCACCACTCTTTTTTCGTGGTATTCGCCCGTATAATTGTGAATAGGATGATCGTTTATACGTCACGTTGTGGTCGAGCAAAGTGTTGAGGTGATGAGCCATCAGTACATGCCAATATG 2393 0.4405 MNQNTLFFFILKPLSSPLIHSYIILFYLLAKNTFCYVDPRFVACSPKTCANANAYNNQSISYPFYIQGIQKPFCGYPGFGISCAPDGFPILNLSNTNYIIHQIFYHNQSLRVSNAAFPNSSGGCFHRTQNLTLPPTKEFSIVPNQRDIRLFYGCELSAWVLEEHKKGCYGENNRSTVMAMYKEESSRNNVSRSCRGEVVETVGEDGIGIEEALERGLLLNWTASDCNVCNRTGGRCGFDLEAHTFKCYCTDRVHSAKCDDPVTTITKKARLSLKAKLGIGLGIGIPCVMVIGLLFLFLLYRRKHTTSGGGQLVSRDSYSDSSSNPHQESSSGYFGVPLFSYEQLKEATNNFDDTKELGDGGFGTVYYGKLPDGREVAVKRLYEHNWRRVEQFMNEVKILTRLRHKHLVSLYGCTSRHSRELLLVYEYISNGTVACHIHGESAKAGFLPWCTRMKIAIETASALAYLHASDIIHRDVKTNNILLDNNYCVKVADFGLSRDFPNNVTHVSTAPQGSPGYLDPEYYNCYQVTSKSDVYSFGVVLIELISSKPAVDMNRSRDEINLSNLAIRKIQESAIGELVDPSLGFDSDSGVKGMIVSVAGLALQCLEKEKELRPSMCEVLHELKRIENAKVEVEVRNEADVHNGVSHSCAHSPPPASPEWDEVGLLTNMKPTSPNSVIDKWESKCTTPNISG 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00816 692 Gene3D Transferase(Phosphotransferase) domain 1 428 641 - -
Pste4g00816 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Pste4g00816 692 Pfam Wall-associated receptor kinase galacturonan-binding 49 113 IPR025287 GO:0030247
Pste4g00816 692 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Pste4g00816 692 SUPERFAMILY Protein kinase-like (PK-like) 325 628 IPR011009 -
Pste4g00816 692 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 686 IPR044652 GO:0004672
Pste4g00816 692 ProSiteProfiles Protein kinase domain profile. 351 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00816 692 Gene3D Phosphorylase Kinase; domain 1 322 427 - -
Pste4g00816 692 Pfam Wall-associated receptor kinase C-terminal 170 251 IPR032872 -
Pste4g00816 692 MobiDBLite consensus disorder prediction 307 331 - -
Pste4g00816 692 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 323 427 - -
Pste4g00816 692 SMART serkin_6 351 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00816 692 Pfam Protein kinase domain 352 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00816 692 FunFam Wall-associated receptor kinase-like 20 428 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00816 Pste-Chr4 6312727 6322639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00816 275 692 Receptor kinase-like Gene Family AT1G25390 58.865 4.53e-166 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste4g00816 Pkinase 2.4e-47 CL0016