Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00809 ATGATTGGGTTGTTTCTCTTACTCTACAAACGAAAACATGCTACCTCAGGTGGACAATTGAAGTCAAGAGATTCTTATTCTGATTCCTCCTCAAATCATCATCGCAGTAGCAGCGAGTACCTTGGAGTGTCACTCTACTCTTACGCCCAGCTTAAAGAAGCAACAAACAATTTCCACCACACTAAAGAACTTGGAGATGGAGGCTACGGTACTGTCTACTATGGTAGACCTTTAAATTATAACACATGGAAACTCCCAGATGGACGGGAAGTTGCAGTGAAGCGCTTATACGAGCATAACTGGCGGCGAGTAGAACAGTTCATGAATGAAGTTAAGATCCTGACATGTTTGCATCACAAACACCTTGTGTCACTATATGGCTGCACTTCACGGCACAGTGGTGAACTTGTGCTTGTGTATGAATACATATCAAACGGTACTGTAGCGTGTCATCTGCACGGAGAATTAGCAAAGAGTGGGTTACTAAAGTGGTCAACACGAATGAAAATTGCAATAGAGACAGCAAGTGCCTTGCGTGAATGTTTGCAAAGGGAAAAGGATATGAGACCTTCCATGTGTGAGGTGTTGGATGAACTCAAAAGGATTGACTTAGAGATACATGTTCAAGACGAGGCAAATGTTGATATTACTTGTGCACATTCACCTGAGTGGGATGAGGTTGGATTGCTCAACAATATCAACCAAACAGTCCCTCATAAATGGGAAAGCAAATCTTCTACGCCTAATATCAGTGGTTAG 759 0.4242 MIGLFLLLYKRKHATSGGQLKSRDSYSDSSSNHHRSSSEYLGVSLYSYAQLKEATNNFHHTKELGDGGYGTVYYGRPLNYNTWKLPDGREVAVKRLYEHNWRRVEQFMNEVKILTCLHHKHLVSLYGCTSRHSGELVLVYEYISNGTVACHLHGELAKSGLLKWSTRMKIAIETASALRECLQREKDMRPSMCEVLDELKRIDLEIHVQDEANVDITCAHSPEWDEVGLLNNINQTVPHKWESKSSTPNISG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00809 252 Gene3D Transferase(Phosphotransferase) domain 1 43 180 - -
Pste4g00809 252 Pfam Protein tyrosine and serine/threonine kinase 60 178 IPR001245 GO:0004672|GO:0006468
Pste4g00809 252 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 181 243 IPR044652 GO:0004672
Pste4g00809 252 SUPERFAMILY Protein kinase-like (PK-like) 46 179 IPR011009 -
Pste4g00809 252 ProSiteProfiles Protein kinase domain profile. 58 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00809 252 ProSitePatterns Protein kinases ATP-binding region signature. 64 94 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00809 Pste-Chr4 6286108 6287136 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00809 169 252 Receptor kinase-like Gene Family AT1G25390 34.043 8.57e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste4g00809 PK_Tyr_Ser-Thr 6.9e-16 CL0016