Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00802 ATATTAATGAATGCAAGGAATCCAATGATTGTATCAATTAGAAAAAATGCATTAACTTTCCTCTGGGAGCTACCGTTGTTCTTGCCCATATGGATACAAAGGAGATGGTGTGGGTGTAACGAACTAGAGGAGGATAGTAAAAATTTTGATGAAGGCATGGTCTTAGGCCAAGGTGGGCAAGGAACAATTTACAAAGGAATATTACCTAATAATAGAGTTGTAGAAATAAAAAGATCCAGAATTTGCAATCCAAACCAAATTGAGAATTTCATCAATGGGGTGATGATGCTTTCTCAAATCAACCCTAAGAATGCGGTAAAACCATTCGGATGCTGTTTAGAATCAGAAGTTTGCTTACTTGTTTATGAATTTATTCCCAATGGTACAGTTTATGAACATCTTCATGATCATGGTCAATTTTTAAGACTTACATGGAAAATAAGATTGCAAATAGCAACAGAAACTGCTGGACTACCTCTATACCAATTATACATAGATGTGAAAACTGAAAATATACTACGTGATTACAATCTCACTGCTAAGGTTTCTGATTTCGGAATTTCAAGGATTATTCCTCTTGATCAAACTCAATTAACCACTTTGGTAAAAGGAACATTAGGTCAATTAACAGGGAAGAGTGATGTGTTCAGCTTTGTAGTTGTCTTAGTGGAATTGCTAAGAGGAAAGAAGGCACTTTCTTTTGATAGGCCAGAGCCTCATAGAAACCTTGCAGTGTACTTTCATTCTTTATATGTTGCATTCCTTGTTGTAATGGATGAGGGTTGGTTACCTAGAATTATAGATATACACAGAATAGATGAGGCAAATGATGAGTAA 837 0.3536 ILMNARNPMIVSIRKNALTFLWELPLFLPIWIQRRWCGCNELEEDSKNFDEGMVLGQGGQGTIYKGILPNNRVVEIKRSRICNPNQIENFINGVMMLSQINPKNAVKPFGCCLESEVCLLVYEFIPNGTVYEHLHDHGQFLRLTWKIRLQIATETAGLPLYQLYIDVKTENILRDYNLTAKVSDFGISRIIPLDQTQLTTLVKGTLGQLTGKSDVFSFVVVLVELLRGKKALSFDRPEPHRNLAVYFHSLYVAFLVVMDEGWLPRIIDIHRIDEANDE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00802 278 Gene3D Transferase(Phosphotransferase) domain 1 125 277 - -
Pste4g00802 278 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 40 252 IPR045274 GO:0007166
Pste4g00802 278 SMART serkin_6 49 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00802 278 ProSiteProfiles Protein kinase domain profile. 49 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00802 278 SUPERFAMILY Protein kinase-like (PK-like) 28 245 IPR011009 -
Pste4g00802 278 Pfam Protein tyrosine and serine/threonine kinase 53 229 IPR001245 GO:0004672|GO:0006468
Pste4g00802 278 Gene3D Phosphorylase Kinase; domain 1 33 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00802 Pste-Chr4 6250155 6251582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00802 41 276 Receptor kinase-like Gene Family AT3G25490 48.425 1.40e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste4g00802 PK_Tyr_Ser-Thr 5.7e-18 CL0016