Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00800 ATGAATGAAATAGAGATCCTTACTCGCTTACGCCACAGAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTCATGACCACGAGTTACTTCTGGTATATGAATACATTCCTAACGACACTGTTGCTAGCCATCTCCATGGTGATTTAGCAAGAGCGGAGAAGAAAGAGAAGGAAATAGCTTGGAAGATGGCAGCACTGCAGAAATTCAAGCTGTTGGCGACGCGGTGTGGAGTGGGGGAAAGCCCAAGCCAGAGCCCAAGGACGAGCCCACTAGTTCAATTCCGGCGGCCCAAAACGAGTCTGCGTAGTCTGCTAAGCCTGAATCGATCAGGTCGGCGACAAGAAGGCGTGGTGGAGAAGGATTCGATGCGGAGACACTCACTGAAGGATCTGTTTGTGGCTTCGCCACCTCGAGTGCAAGAAGTTCATGAAACTACTCCAATGTTGGTTTCTCATTCTTGGAGTAATGTAGCCGGTTCGACCAACCCGGCTTGGGTCCGTTTTCGTTGCAGGTACTTGTTCAAAAGGAAACATTGGCGCCCCCTCCTCCTCACTATTCCCGAATAA 567 0.5009 MNEIEILTRLRHRNLVSLYGCTSRHDHELLLVYEYIPNDTVASHLHGDLARAEKKEKEIAWKMAALQKFKLLATRCGVGESPSQSPRTSPLVQFRRPKTSLRSLLSLNRSGRRQEGVVEKDSMRRHSLKDLFVASPPRVQEVHETTPMLVSHSWSNVAGSTNPAWVRFRCRYLFKRKHWRPLLLTIPE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00800 188 PANTHER OS08G0359900 PROTEIN 63 188 - -
Pste4g00800 188 Pfam Protein tyrosine and serine/threonine kinase 1 57 IPR001245 GO:0004672|GO:0006468
Pste4g00800 188 Gene3D Transferase(Phosphotransferase) domain 1 1 73 - -
Pste4g00800 188 SUPERFAMILY Protein kinase-like (PK-like) 1 48 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00800 Pste-Chr4 6229924 6233184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00800 1 48 Receptor kinase-like Gene Family AT1G25390 79.167 2.72e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste4g00800 PK_Tyr_Ser-Thr 3.7e-06 CL0016