Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00792 ATGGTCTCCCTTCTTAATTTGACATCAGTAATAACTATATTTTTGTGGCAGCTTCTGGTTGTTGTCTCAGCTAATGAGGATGGAGAGTGTCCTCCATCTTACGATTGTGGATATCTTGGCCAAATTAAGTTTCCTTTCACTACCGCAAGAATGTACCCTGTTCTAAAGGTTGACGAACCTCGTACCATAATTATCTCAGACGAGGAACTTGATAAATATTTGCAAAACAGAAGTTGCAAAGCCTTCAGCAACAATCTCACTCTTCCTCACTCCTCTCCTTTAGCCTCTTTCTACAACAAATATAATATCACTATCTTCAGATGCCATCACTCCCTCAGCAACACTTCCCTTCCAAGTTATTTTCATAAATATTCAAACTGCTCCGATCAGTACTTTATCTACTATGCCAATCCAAATACTCAAACTACTCTGCCTTCTGACTGGCCCAAGTCTTTAGCACCGTGCTCAACGGTTCAGCTTACAACACAGGGACTGTCTACTGACGATCCCTTTCATTTTCTAACTGCTGCCATGGTTCTTGAACTACAGTTATCTGATGATTGTGAGAAGTGTCTTCGTCTTGGAAAAAGCCAATGTTTACCTGACACTAAAGGAAAACTCTATTGTGCCCAAGAGAAAACCAGATGGAAGATAGAAACAGCTTCGGTCGTGGTGGCTGCTGGAGTTGTCATGCTGCTAATGGTCTTGGCTTGTTACTTCAAGACAGACATATGTTCGAGGGAGAATCCAACACATCGGATTATTGAGGATTTTTTGAAAGAACATAGACCTCTTCCTACAGTTAAGTACAGTTATTCAGATATTAAAAAGATAACCAATTCTTTTAAAAACAAATTAGGTCAAGGGGGATTTGGGAGTGTGTACAAAGGGAAGTTACATGATGGCCGTGTTGTTGCAGTAAAGATTTTAACTAAATCAGGAGAGAATGCAGAAGAATTTATCAATGAAGTTGCAAGTATTAGTAGAACCTCACATGTCAACATTGTTAAGCTTTTGGGATTCTGTTTTGACGGTTCTAAACGAGCTCTAATATATGAGTTTATGTGCAATGGGTCTCTTGAAAAGTTTATATATGAAGAGAGAAATCCGTTAGAGATTGCATGTCCATTGAATTGCAAAATATTGTATGATATTGCAATTGGTATTGCTCGTGGATCGGAGTACTTACATAAAGGTTGCAACACTAGAATTTTGCATTTTGACATAAAACCTCACAATATACTATTAGATGAGGAATTTTGTCCAAAAATTTCAGATTTTGGACTTGCAAAAATATGTCCAAGTAAAGAAAGCGTTGTATCCATATTTGGCACCAGAGGAACTGCAGGCTATATTGCTCCAGAAGTTTTTTCTAGAAATTTTGGTGCAGTATCACATAAGTCAGACGTTTATAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAATATTAAGGCTGAAGTAGAAAGCTCGAGTGAAATATATTTTCCTCATTGGATTTACAACCGTCTTGAATCAGATCAGGAGCTTCGGTTAGCAAACATAATAAATGAAGGTGATGGCCAAATTGTGAGAAAAATGGCAATTGTGGGCTTATGGTGCATACAAAGTCACCATTCAACTCGACCAACCATAAGTAAAGTGTTGAAAATGTTGGAAAGTGAAATTGATTTAATTCAAATTCCGCCTAAACCTTTTTTATCTTCTCCTTCAACCTCTCCTGTCCATTTGTCTTGTGAGCTAGTAAGTTATGAGAATACTAAGATGTAA 1779 0.3761 MVSLLNLTSVITIFLWQLLVVVSANEDGECPPSYDCGYLGQIKFPFTTARMYPVLKVDEPRTIIISDEELDKYLQNRSCKAFSNNLTLPHSSPLASFYNKYNITIFRCHHSLSNTSLPSYFHKYSNCSDQYFIYYANPNTQTTLPSDWPKSLAPCSTVQLTTQGLSTDDPFHFLTAAMVLELQLSDDCEKCLRLGKSQCLPDTKGKLYCAQEKTRWKIETASVVVAAGVVMLLMVLACYFKTDICSRENPTHRIIEDFLKEHRPLPTVKYSYSDIKKITNSFKNKLGQGGFGSVYKGKLHDGRVVAVKILTKSGENAEEFINEVASISRTSHVNIVKLLGFCFDGSKRALIYEFMCNGSLEKFIYEERNPLEIACPLNCKILYDIAIGIARGSEYLHKGCNTRILHFDIKPHNILLDEEFCPKISDFGLAKICPSKESVVSIFGTRGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVLEMVGRRKNIKAEVESSSEIYFPHWIYNRLESDQELRLANIINEGDGQIVRKMAIVGLWCIQSHHSTRPTISKVLKMLESEIDLIQIPPKPFLSSPSTSPVHLSCELVSYENTKM 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00792 592 ProSiteProfiles Protein kinase domain profile. 280 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00792 592 FunFam Suppressor of npr1-1 constitutive 4 253 354 - -
Pste4g00792 592 Gene3D Transferase(Phosphotransferase) domain 1 355 569 - -
Pste4g00792 592 Pfam Protein kinase domain 283 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00792 592 Gene3D Phosphorylase Kinase; domain 1 246 354 - -
Pste4g00792 592 FunFam PR5-like receptor kinase 355 567 - -
Pste4g00792 592 SMART serkin_6 280 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00792 592 SUPERFAMILY Protein kinase-like (PK-like) 262 556 IPR011009 -
Pste4g00792 592 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
Pste4g00792 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Pste4g00792 592 PANTHER RUST RESISTANCE KINASE LR10-RELATED 252 573 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00792 Pste-Chr4 6162967 6165385 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00792 14 581 Receptor kinase-like Gene Family AT1G66910 37.771 1.48e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste4g00792 Pkinase 9.5e-44 CL0016