Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00787 CTCACCAATAGGCAATAGGAAGCATGGCATTAACATATAACATCCTTGTTTCAGTTAAGGGCTATGTTAATAACAAATAACAATAACTCCACCCAAATTATTACTCCCATTCCATTACCGTTAAGCCCTTTCATTTTCTCATTAACTGCACATTTAACACTCTGCTTTACACAAACACAAAACACTCTCCTCAGCTCCCTCCACTTTACTCCTCACTCACTCTCTCTCTCTCTCAGCCCAGCAATGGCAGAAACACTCTCTCACCTCACAGTTCCTGTTTTACTTTTTCATTTTCTTCTTCTCACGGTTCAATGTTTCAGTAACTCAGATTTCGACGCTTTAGTGGCCTTCAAGACCGCTTCAGACTCATCTCAAAAGCTCAGTACATGGAACACCAGCAACGCCTACCCGTGTTCCTGGAGCGGCGTGTCGTGCATTCGCAACCGAGTCTCGCGACTCGTTCTCGAAAACCTCGACCTCCAAGGTTCCATTCACCCCTTAACCTCGCTCACTCAGCTCCGAGTTCTCAGTCTCAAAGGGAACCGTTTCTCAGGTCCCGTTCCCAACCTCTCCAACCTCACCGCTCTCAAACTCCTCTTCTTGTCACGCAATGCCTTCTCCGGCGAGTTCCCGGCGACCCTCACCTCGCTCTTCCGCCTCTACCGTCTCGATCTGTCCAACAACAACTTCTCCGGCGAGATACCGGAGACGGTCAACCACTTGACCCACCTCCTCACCCTCCGTCTCGACGGGAACAACTTCTCCGGCCACATCCCCGACGTCAACCTCCCCGGCCTCCAAGAGTTCAACGTCTCCGGCAACCGCCTCTCCGGCGAGATACCCAAGTCCTTATCAAATTTCCCGGAATCCTCATTCGGGCAAAACCCGTTTCTGTGCGGAGCCCCAGCTAAAAAATGCGCGTCCGACCCGACCAAACCGGGATCCGAAGGCGCCATTGCTTCGCCGTTGTTACCGCAAAACAGCCCAACAACGACAGTATCATCTTCACCAAGCTCAATGCCGAAAACGTCAACAGCCACGTCAAATAGCAAGAGGCACGAGAAGGGTGGTTCGAAAATAAGTCCAGTGGCGCTTATAGCTATTATAGTGGGTGATGTTTTGGTCCTTGGCATAGTGTCGTTGCTTTTGTATTGCTACTTCTGGAGGAACTATAGGTTGAAGGAGGGGAAAGGGTCGAAGCTTTTTGAGAGTGAGAAGATTGTGTATTCGTCGAGTCCGTACCCTGCACAGGGAGGGTTGGAGAGGGGTAGAATGGTGTTCTTCGAGGGGGAGAAAAGGTTTGAACTTGAAGACCTGCTGCGAGCCTCTGCGGAAATGCTTGGGAAGGGTGGGTTTGGGACTGCGTACAAAGCGGTTCTGGATGATGGGAATGTGGTTGCGGTGAAGAGACTGAAGGAGGCGCAGATAACCGGCAAGAGGGAGTTCGAGCAACACATGGAGGTGTTGGGAAGGTTAAGGCATCCCAATATTGTTAGCTTGAGGGCTTACTATTTCGCCCGCGAGGAGAAGCTGCTGGTCTATGATTACATGCCCAATGCCACCTTGTTCTGGCTCCTTCACGGGAACCGAGGACCTGGACGAAGCCCAGTGGACTGGACCACAAGGCTGAAGATAGCAGCGGGAGCGGCGCGAGGAGTGGCCTTCATTCATAACGCGTGCAAGTCACTTAGACTATGCCATGGTAACATAAAATCGACGAACGTCTTACTGGACAAGCAGGGGAACGCGCGGGTATCGGATTTTGGGCTCTCAGTGTTCGCGGGACCGGGGATGGGCGGGAGAAGTAACGGGTACCGTGCGCCGGAGGCATCGGATGGTCGAAAACAGAGTCAAAAGTGTGACGTGTACTCATTCGGTGTGCTGCTGCTGGAGCTGCTGACAGGGAAGTGCCCCTCCATGGTGGAGAGTGCATACGGTGGGGTGGTGGACCTACCGAGGTGGGTCCAATCAGTGGTGAGGGAGGAGTGGACTGCTGAGGTGTTTGATTTGGAGCTGATGAGGTACAAGGATATTGAGGAGGACATGGTGGGGCTCCTTCAGATTGCAATGACGTGTACCGCTGCTGCACCTGATCAACGCCCCAGGATGACCCACGTCCTCAAGATGATTGAGGAGTTACGCGGGATGGAGGTGTCACCCTCCATATCTGACTCACCTTCCTTCTCCGAAGATGCCTGTGCACCCACTCACTGAAATACCCACTAACTAGCTTCAGCTTCTTTGGATTTCTTTGTAAATCACATTTTTCGATTTCCGCCTTTGCTTTTTCTAATTATTTTCAATTTCCTCTTTCTTTCCTCCCACTCCTTTCTCCTATTTCCTTCCTAAATTAATTTTATTGACTAGTAGCATCCTTTGGTATACGGTATTGTTGGGTCAGTTCAATATTGGTTGACGTTGACCGGAATGAATTCGGTTTCAAAACAAAAGCATGCATAGTTTGGTTAGCCAAATCTAATTTGTGAAATGTGCTGTCTGTTTTGACTTTGACCGTCACTATTATGCTTTTCTTCTGTGCTTCCATCGCGTTCTTTTTTCTGTGGTCTAATTTGTCCATACCTGAACTTCCTGTTACCAAACAGATTATTCTGTAACCTTCTTCTGCA 2627 0.5002 MLITNNNNSTQIITPIPLPLSPFIFSLTAHLTLCFTQTQNTLLSSLHFTPHSLSLSLSPAMAETLSHLTVPVLLFHFLLLTVQCFSNSDFDALVAFKTASDSSQKLSTWNTSNAYPCSWSGVSCIRNRVSRLVLENLDLQGSIHPLTSLTQLRVLSLKGNRFSGPVPNLSNLTALKLLFLSRNAFSGEFPATLTSLFRLYRLDLSNNNFSGEIPETVNHLTHLLTLRLDGNNFSGHIPDVNLPGLQEFNVSGNRLSGEIPKSLSNFPESSFGQNPFLCGAPAKKCASDPTKPGSEGAIASPLLPQNSPTTTVSSSPSSMPKTSTATSNSKRHEKGGSKISPVALIAIIVGDVLVLGIVSLLLYCYFWRNYRLKEGKGSKLFESEKIVYSSSPYPAQGGLERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKEAQITGKREFEQHMEVLGRLRHPNIVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRSPVDWTTRLKIAAGAARGVAFIHNACKSLRLCHGNIKSTNVLLDKQGNARVSDFGLSVFAGPGMGGRSNGYRAPEASDGRKQSQKCDVYSFGVLLLELLTGKCPSMVESAYGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEDMVGLLQIAMTCTAAAPDQRPRMTHVLKMIEELRGMEVSPSISDSPSFSEDACAPTH 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00787 716 SUPERFAMILY Protein kinase-like (PK-like) 424 689 IPR011009 -
Pste4g00787 716 Gene3D Transferase(Phosphotransferase) domain 1 496 703 - -
Pste4g00787 716 Gene3D Ribonuclease Inhibitor 147 292 IPR032675 -
Pste4g00787 716 Gene3D Ribonuclease Inhibitor 82 146 IPR032675 -
Pste4g00787 716 FunFam Leucine-rich repeat receptor-like protein kinase 86 239 - -
Pste4g00787 716 ProSitePatterns Protein kinases ATP-binding region signature. 426 448 IPR017441 GO:0005524
Pste4g00787 716 MobiDBLite consensus disorder prediction 699 716 - -
Pste4g00787 716 MobiDBLite consensus disorder prediction 300 326 - -
Pste4g00787 716 Gene3D Phosphorylase Kinase; domain 1 400 495 - -
Pste4g00787 716 FunFam pollen receptor-like kinase 1 393 495 - -
Pste4g00787 716 SUPERFAMILY L domain-like 96 281 - -
Pste4g00787 716 CDD STKc_IRAK 426 692 - -
Pste4g00787 716 ProSiteProfiles Protein kinase domain profile. 420 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00787 716 MobiDBLite consensus disorder prediction 697 716 - -
Pste4g00787 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 496 700 - -
Pste4g00787 716 Pfam Protein kinase domain 424 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00787 716 Pfam Leucine rich repeat N-terminal domain 87 124 IPR013210 -
Pste4g00787 716 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 77 693 IPR046959 -
Pste4g00787 716 MobiDBLite consensus disorder prediction 287 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00787 Pste-Chr4 6139568 6142978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00787 88 715 Receptor kinase-like Gene Family AT1G68400 66.820 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste4g00787 Pkinase 8.1e-35 CL0016