Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00776 ATGAAAAATGCAACAAGATTAAGAGGAACCAACACAAAAAGAACAATCACTAAAATGCAAACCCACCTGTTGTTCTTCTTATATTGTTACATTGGCCTCTCACATGTTTTTACTGAAGCTGCAGCAGATGATGAATTGTCAACTCTGCTCTCAATCAAATCCACTCTCATTGACCCAATGAAGCATCTGAAGGATTGGCAACAACCAAGCAATGTGACACAGGGAGGTTCACTTCATTGTAACTGGACTGGAGTTGGTTGCAACTCTAAAGGCTTAGTAGAGAGTCTTGACCTCTCCAACATGAACCTCAGCGGTCATGTTTCAGACCACATTCAGTCTTTTTCAATTCTGTCTTCTTTCAACATAAGTTGTAACAACTTTGCTTCATCACTGCCCAAATCATTGTCCAACCTAACCTCTCTCCAGAGCTTAGATGTGAGCCAGAACTCCTTCACTGGCAGCTTCCCCACTGGTCTTGGAAGAGCTGCAGGCTTGAGATCAATTAATGCATCGAGCAATGATTTTTTGGGTTTTCTTCCTGAGGATATTGGAAATGCAACATTGCTAGAAACCCTTGACTTTCGAGGGAGCTACTTTATGTGTCCAATCCCCAGTAGTTTTAAGAATTTGCAGAAGCTCAAGTTTCTTGGCCTTTCAGGGAATAGCTTCACTGGGAGGATTCCAGGATATCTTGGGGAACTCACTTCTCTGGAGACATTGATTATAGGATACAACGAGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTCACCAATCTTCAATACCTTGACTTGGCTGTAGGCAATCTCAGTGGACAAATTCCACCGGAATTGGGTAAGCTGACAAAACTCAACACAATTTATTTCTACCATAACAAATTCTCAGGAAAAATTCCACCTCAACTTGGCAACATTACTTCACTAGCATTTTTGGACCTCTCTGACAATCAGATCTCAGGAGAGATTCCAGCAGAACTTTCTAAATTGGAAAATCTGAAGCTCTTAAATCTGATGACCAACAAACTAACTGGTCCAGTACCAGAGAAGCTTGGTGAATTGAAAAACTTACAGGTGCTTGAGCTATGGAAAAACTCTTTACATGGTCCTTTGCCACATAACCTTGGACAGAACTCTCCTTTGCAGTGGTTGGATGTATCATCCAACTCATTGTCCGGGGAGATCCCTCCAGGTTTGTGTACTACAGGAAATCTCACTAAACTAATCCTCTTCAACAATTCATTCAGTGGTTCCATTCCAAGTGGACTTGCAAACTGTTTGTCTTTGGTGCGTGTTCGGATTCAGAACAATCTTATTTCTGGAACTATTCCAGTTGGATTTGGAAACCTCCTCGGCCTTCAACGGCTGGAGTTGGCAAAGAACAACATCAGTGGGAAAATTCCTAGTGATATTACCTCATCCACATCACTCTCTTTCATTGATGTATCTTGGAACCACCTTGAGTCATCTCTACCCTCAGATATTTTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCAAAACAATTTTGGAGGAAACATCCCTGACGAGTTCCAGGACTGTCCATCTCTGTCAGTGCTGGATCTTTCAAACACCCGTATATCTGGCACAATCCCTGAAAGCATTGCTTCTTGTCAAAAATTAGTCAATCTTAACCTTCGAAATAACCAGTTGACAGGAGAAATCCCAAAATCAATCACAAACATGCCCACCTTATCTATTCTTGATCTGTCCAACAATTCACTGACTGGTAGGATACCTGAAAATTTTGGCAACTCCCCAGCTCTGGAAATGATGAACCTATCCTACAACAAACTTGAAGGTCCAGTACCCTCAAATGGGATGTTGGTGACCATAAATCCTAATGATCTTACCGGCAATGAGGGTCTTTGTGGAGGAATTCTCCCTCCATGTTCTCCAAGTTTGGCTATAACAAGCCATCGAAACAGCTCACATATCAGACACATCATTATTGGTTTTGTGAGTGGCATTTCAGTGATTTTAGCTCTTGCTGCAGTATATTTTGGTGGTAGATGTTTATACAAGAGATGGCACTTGTATAACAATTTCATCCATGACTGGTTCAAACAGAGCAATGAGGATTGGCCATGGAGGTTGGTAGCATTCCAGAGGGTAAGTTTCACTAGTTGTGACATCCTCACTTGCATAAAAGAATCAAATGTCATAGGCATGGGTGGCACTGGTATTGTTTACAAAGCTGAAATCCATAGACCTCATGTAACGGTAGCAGTGAAGAAACTCTGGAGGTCACGGACAGACATAGAAGATGGGAATGATGTGTTGAGAGAAGTGGAACTCCTAGGGAGACTTAGGCACAGGAATATTGTAAGGCTGTTGGGGTATGTACACAATGAAAGGAATGTGATGATGGTTTACGAGTACATGCCTAATGGGAATCTTGGAACAGCACTGCATGGCGAGCAATCTGCACGGTTGCTTGTTGACTGGGTATCAAGGTACAACATAGCTCTTGGTGTTGCACAAGGGCTTAACTACCTCCACCATGATTGCCACCCATCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTAGATGCAAGAATAGCAGATTTCGGGTTGGCAAGGATGATGATTCAAAAGAATGAAACAGTGTCCATGGTGGCTGGATCATATGGATACATTGCACCAGAATATGGATACACTCTGAAGATTGACGAGAAGATTGACATATACAGCTACGGAGTGGTGCTTTTGGAGCTCCTAACTGGCAAAATGCCTTTAGACCTTTCGTTTGAAGAATCACTTGACATAGTAGAATGGATAAGGAAAAAGAAAAACAACAAAGACTTGTTAGAAGCACTAGATCCTGCCATAGCTAGTCAGTGTAAACATGTCCAAGAAGAAATGCTGCTTGTGCTCCGGATTGCACTACTATGCACCGCAAAGCTACCCAAGGAAAGGCCAACCATGAGAGACATCATCACAATGCTTGGAGAGGCAAAGCCTAGAAGAAAAAGTGTTTGCCATAATGGGGGACAAGACAACAGTAGCATGGAAAAGTCAACCATCTTTATTACCTCCCCGGTAGTCAGTCTTTTGTAG 3105 0.4225 MKNATRLRGTNTKRTITKMQTHLLFFLYCYIGLSHVFTEAAADDELSTLLSIKSTLIDPMKHLKDWQQPSNVTQGGSLHCNWTGVGCNSKGLVESLDLSNMNLSGHVSDHIQSFSILSSFNISCNNFASSLPKSLSNLTSLQSLDVSQNSFTGSFPTGLGRAAGLRSINASSNDFLGFLPEDIGNATLLETLDFRGSYFMCPIPSSFKNLQKLKFLGLSGNSFTGRIPGYLGELTSLETLIIGYNEFEGEIPAEFGNLTNLQYLDLAVGNLSGQIPPELGKLTKLNTIYFYHNKFSGKIPPQLGNITSLAFLDLSDNQISGEIPAELSKLENLKLLNLMTNKLTGPVPEKLGELKNLQVLELWKNSLHGPLPHNLGQNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFSGSIPSGLANCLSLVRVRIQNNLISGTIPVGFGNLLGLQRLELAKNNISGKIPSDITSSTSLSFIDVSWNHLESSLPSDIFSIPTLQTFIASQNNFGGNIPDEFQDCPSLSVLDLSNTRISGTIPESIASCQKLVNLNLRNNQLTGEIPKSITNMPTLSILDLSNNSLTGRIPENFGNSPALEMMNLSYNKLEGPVPSNGMLVTINPNDLTGNEGLCGGILPPCSPSLAITSHRNSSHIRHIIIGFVSGISVILALAAVYFGGRCLYKRWHLYNNFIHDWFKQSNEDWPWRLVAFQRVSFTSCDILTCIKESNVIGMGGTGIVYKAEIHRPHVTVAVKKLWRSRTDIEDGNDVLREVELLGRLRHRNIVRLLGYVHNERNVMMVYEYMPNGNLGTALHGEQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPSVIHRDIKSNNILLDANLDARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKIDEKIDIYSYGVVLLELLTGKMPLDLSFEESLDIVEWIRKKKNNKDLLEALDPAIASQCKHVQEEMLLVLRIALLCTAKLPKERPTMRDIITMLGEAKPRRKSVCHNGGQDNSSMEKSTIFITSPVVSLL 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00776 1034 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 198 298 - -
Pste4g00776 1034 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 381 643 - -
Pste4g00776 1034 Gene3D Phosphorylase Kinase; domain 1 723 806 - -
Pste4g00776 1034 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 393 998 - -
Pste4g00776 1034 SMART LRR_typ_2 475 498 IPR003591 -
Pste4g00776 1034 SMART LRR_typ_2 138 162 IPR003591 -
Pste4g00776 1034 SMART LRR_typ_2 258 282 IPR003591 -
Pste4g00776 1034 SMART LRR_typ_2 354 378 IPR003591 -
Pste4g00776 1034 SMART LRR_typ_2 450 474 IPR003591 -
Pste4g00776 1034 SMART LRR_typ_2 306 330 IPR003591 -
Pste4g00776 1034 SMART LRR_typ_2 570 593 IPR003591 -
Pste4g00776 1034 SMART LRR_typ_2 210 234 IPR003591 -
Pste4g00776 1034 SUPERFAMILY L domain-like 79 325 - -
Pste4g00776 1034 ProSitePatterns Protein kinases ATP-binding region signature. 730 754 IPR017441 GO:0005524
Pste4g00776 1034 SMART serkin_6 724 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00776 1034 SUPERFAMILY RNI-like 251 604 - -
Pste4g00776 1034 FunFam MDIS1-interacting receptor like kinase 1 807 1016 - -
Pste4g00776 1034 ProSiteProfiles Leucine-rich repeat profile. 308 331 IPR001611 GO:0005515
Pste4g00776 1034 Pfam Leucine rich repeat 429 487 IPR001611 GO:0005515
Pste4g00776 1034 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Pste4g00776 1034 Pfam Protein kinase domain 726 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00776 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 849 861 IPR008271 GO:0004672|GO:0006468
Pste4g00776 1034 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 42 197 - -
Pste4g00776 1034 Gene3D Transferase(Phosphotransferase) domain 1 807 1023 - -
Pste4g00776 1034 PRINTS Leucine-rich repeat signature 570 583 - -
Pste4g00776 1034 PRINTS Leucine-rich repeat signature 309 322 - -
Pste4g00776 1034 Pfam Leucine rich repeat N-terminal domain 42 88 IPR013210 -
Pste4g00776 1034 SUPERFAMILY Protein kinase-like (PK-like) 717 998 IPR011009 -
Pste4g00776 1034 ProSiteProfiles Protein kinase domain profile. 724 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00776 1034 Gene3D Ribonuclease Inhibitor 254 349 IPR032675 -
Pste4g00776 1034 Gene3D Ribonuclease Inhibitor 165 253 IPR032675 -
Pste4g00776 1034 Gene3D Ribonuclease Inhibitor 44 164 IPR032675 -
Pste4g00776 1034 Gene3D Ribonuclease Inhibitor 350 644 IPR032675 -
Pste4g00776 1034 FunFam MDIS1-interacting receptor like kinase 1 724 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00776 Pste-Chr4 6066209 6069500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00776 19 1034 Receptor kinase-like Gene Family AT1G08590 64.320 0.0 1301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste4g00776 Pkinase 1.6e-50 CL0016