Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00755 ATGAAAATTACTTTTGGAACTATCATGGCTCCTGATCCAAGAGTGATTAAGGCTTATAATGCTATGAGGTCCTTAGGAATTTCTGATGAAGAGGTGAAACCCGTGCTGAAAAATTTGTTACGTTTGTTTGATAGAAACTGGGAACTTATTGAAGAAGACAATTATCGTACACTTATAGATGCATACTTTGAGTTAAAGGAAGATAAGGTTGGTCTTAACATCTTTTGTTTGGTAGATGAGAATTTACACCAAGCAGAAGGTAAGAGAAAAGCTCCAACGAGTTATCTTGATGAGAAAAAGCCAAAACAGAAACTGCACTTGGTAGATGGAGATGACCAGGTTCATTCAACTGAAAACTCAAGTCAAGTGTTGTCTGTAGAAGACACGGAAATACCTCCCAACTCTTTTAAACAGGAAATCATTAAACGCTCTCAAACCTCCGTTAGACGTATGGAGCCCACAACGAGCTCACAAGCATTACGGACAATGTTGAGTGGTGGAAAAAGCATCTCAGCTTTACCTTGCATGGCTCCTAGAGATAGAAAATTTCATGGTGAGGCAGGTCATTGTGAAGATCCAATTGATGAAGCAAGCAATCCTCGTAACCAGAAGAAAAATATATCAGCCCATCATCATCAGAAGGAGCGGATGACACCCAGAACTGAGAAACTTCAGTTACATCTTGGACCCGTTCCAAAGAGTTACTATGGCTCATCTGATGCTTCAAATGGAAATCGTGGTGGCAAATCTCTATCAGCTCTGCATCAGAATGTGCACAAGAAAGATGGTAGCTCAGCATGCAATAGTAAAAACAGAATTCAGAAGGGTAATATTGACATTGCGTCTTCTCCTTCGGGTGAAATTAAAATTTCTTTGAACTGCGATGCTGCTTTGGGACAACCAAACTTCTGTATTCCTGATTTAGATGCTGTGATGAAGTCCATGGAGGAGAAATACCTGAAGGCTTACCAGATCGTCGAGCCTCAATCATCTATGGTTAAGCTGTTAGATGATTTATGTGGAAGTTACTATAAGCTGGGCTTGAATTCACGCAATGTTGCATGCCTGCCACCGCAAGCTGTTACTGAAGATGAGAAGAATTCCTTACACTTCCTCGATGACATTGCAAAAGGTTCAGAGAATGTAAATATATCATTGTTAGATGAAACTGGAAGTGAGGCCTTGCCAAAGTTTAATTACATACCCTATAATGTAATATACCAAGATGCTAACGTGAACATTTCACTTGCTCGTATTGCGGATGAGGGTTGCTGTGCTGACTGTGCTGGCAACTGTCTTTCCTTATCACTTCCTTGTGCATGTTCTCAAGAAACAGGTGGAGAGTTTGCTTACACTCCACAGGGTTTGTTGAAAGAAGATTTTTTGAAAGTTTGCATGTCTATGAAATTGGAACCTCAAGAGCATCATTTTGTGTATTGCCAAGAATGCCCCTTGGAGAGGTCTAAGAGTGACATCATGCCTGAACCATGCAAGGGGCATCTGGTTAGGAAGTTTATCAAGGAATGCTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGGGTAGTGCAACGAGGTTTAAGATGTAAATTGCAGGTGTTTTTGACTCGAGAAGGAAAGGGATGGGGGGTCAGAACACTAGAAGATTTGCCTAAAGGATGTTTTGTGTGTGAATATTCTGGGGAAATATTGACCAATACAGAATTATATGAAAGGATTATGCAGAATAGCGGCAATGACAGGCATACATATCCTGTAACCCTTGATGCAGACTGGGGATCGGAAGGGGTATTAAAGGATGAGGAGGCACTATGCTTAGATGCAACATATAACGGAAATGTTGCAAGGTTTATCAATCATAGGTTAGTGTCAATAACTACCTACTGTCTGCTTTCTTTCTTTCTTTTACGAATAATGGAGCAAAGATTAGAACCATATCTGATAATGTCTAGCTCCAGATGCTCGGACGCAAATCTGATAGACATTCCTGTTGAAGTGGAGACGCCTGATCGTCACTATTATCATCTTGCCCTCTTCACAAACAGAAATGTGAACGCATACGAGGAATTGACATGGGACTATGGTATAGACTTCGATGATCATGAGCATCCCATTAAAGCATTTAATTGTTGTTGTGGAAGTGGCTTCTGCCGTGATAATAAACAAAAA 2172 0.4065 MKITFGTIMAPDPRVIKAYNAMRSLGISDEEVKPVLKNLLRLFDRNWELIEEDNYRTLIDAYFELKEDKVGLNIFCLVDENLHQAEGKRKAPTSYLDEKKPKQKLHLVDGDDQVHSTENSSQVLSVEDTEIPPNSFKQEIIKRSQTSVRRMEPTTSSQALRTMLSGGKSISALPCMAPRDRKFHGEAGHCEDPIDEASNPRNQKKNISAHHHQKERMTPRTEKLQLHLGPVPKSYYGSSDASNGNRGGKSLSALHQNVHKKDGSSACNSKNRIQKGNIDIASSPSGEIKISLNCDAALGQPNFCIPDLDAVMKSMEEKYLKAYQIVEPQSSMVKLLDDLCGSYYKLGLNSRNVACLPPQAVTEDEKNSLHFLDDIAKGSENVNISLLDETGSEALPKFNYIPYNVIYQDANVNISLARIADEGCCADCAGNCLSLSLPCACSQETGGEFAYTPQGLLKEDFLKVCMSMKLEPQEHHFVYCQECPLERSKSDIMPEPCKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLRCKLQVFLTREGKGWGVRTLEDLPKGCFVCEYSGEILTNTELYERIMQNSGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRLVSITTYCLLSFFLLRIMEQRLEPYLIMSSSRCSDANLIDIPVEVETPDRHYYHLALFTNRNVNAYEELTWDYGIDFDDHEHPIKAFNCCCGSGFCRDNKQK 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00755 724 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 9 724 - -
Pste4g00755 724 Pfam SET domain 542 696 IPR001214 GO:0005515
Pste4g00755 724 CDD SET_SETDB-like 396 696 - -
Pste4g00755 724 Gene3D SET domain 360 721 IPR046341 -
Pste4g00755 724 SMART set_7 530 702 IPR001214 GO:0005515
Pste4g00755 724 MobiDBLite consensus disorder prediction 184 221 - -
Pste4g00755 724 MobiDBLite consensus disorder prediction 184 199 - -
Pste4g00755 724 MobiDBLite consensus disorder prediction 114 162 - -
Pste4g00755 724 SMART preset_2 372 514 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste4g00755 724 ProSiteProfiles Pre-SET domain profile. 424 527 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste4g00755 724 Pfam Pre-SET motif 375 522 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste4g00755 724 SUPERFAMILY SET domain 367 704 IPR046341 -
Pste4g00755 724 ProSiteProfiles SET domain profile. 530 696 IPR001214 GO:0005515
Pste4g00755 724 Gene3D - 3 68 IPR043017 -
Pste4g00755 724 FunFam SET-domain containing protein lysine methyltransferase family protein 375 628 - -
Pste4g00755 724 MobiDBLite consensus disorder prediction 87 113 - -
Pste4g00755 724 Pfam Ubiquitin-binding WIYLD domain 13 67 IPR018848 -
Pste4g00755 724 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 724 IPR025776 -
Pste4g00755 724 MobiDBLite consensus disorder prediction 87 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00755 Pste-Chr4 5850998 5861556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00755 506 711 C2H2 Transcription Factor Family AT2G23740 36.620 7.71e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste4g00755 SET 6.4e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00755 4 5850998 5861556 Pste4g00755 4 5850998 5861556 ECH
Pste5g03314 5 26337229 26344312 Pste4g00755 4 5850998 5861556 PCT
Pste4g00755 4 5850998 5861556 Pste5g01375 5 8856350 8863795 PCT