Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00754 ATATTAATGAATGCAAGGAATCCAATGATTGTATCCAGTAGAAAAAATGCATTAACTTTCCTCCAGGAGCTACCGTTGTTCTTGCCCATATGGATACAAAGGAGATGGTGTGGGTATCTCACTACTTCTAGGGGGAATCTTTTATGGATATTGGACATTGAAGAAAAAAAAAAACTCATCAAACTTAAAGTGCAATTTTTTCAACAACTAGCCAAGTACAGGTCGACTGAAATAACTAAAATCTTTACGCTAGAGGAACTAAAGGAGACTAGTAAAAATTTTGATGAAGGCATGGTCTTAGGCCAAGGTGGGCAAGGAACAATTTACAAAGGAATATTACCTAATGATAGAGTTGTAGCAATAAAAAGATCCAGAATTTTCAACCCGAACCAAATTGAGAATTTCATCAATGAGGTGATGATGCTTTCTCAAATCAACCCTAGGAATGTGACCCTTGGATGCTGTTTAGAATCAGAAGTTCCCTTACTTGTTTATGAATTTATTCCCAATGGTACTGTTTATGAACATCTTCATGATCATGGTCAATTTTTAAGACTTACATGGAAAATAAGATTGCAAATAGCAACAGAAACTGCTGGAGTCTTAGCATGCCTACCTCTACACCAATTATACATAGATGTAAAAACTGAAAATATACTACTTGATTACAATCTCACCGCTAAGGTTTCTGATTTTGGAGTTTCAAGGATTATTCCTCTTGATCAAACTCAATTAACCACTTTAGTAAACGGAACATTAGATCAATTAACAGAGAAGGGTGATGTGTTCGGCTTTGGAGTTGTCTTAGTGGAATTGCTAACAGGAAAGAAGGCACTTTCTTTTGATAGGCCAGAGCCTCATAGAAACCTTGCAGTGTACTTTCATTCTGTTACTCAAGATTGTAATATTATCATGATTTACAAGTTTATTTTATATGTTGTATTCCTTGTTGTAATGGATAAGGGTAGGTTTCCTAGAATTATAGATATCCACATAATAGATGAGGCAAATGATGTTGCCAATATTGCAGAATATTATTTAAAATTTAAGGGTGAGGAAAGGACTACTATGAAAAAAGTGGCAAAGGAACTTGAAAGCATAAGCATAATGGAAAAACCAAATTGGAAAAAAATCAATTTGACTTTGGAGGAGACAAATTTTTCTCAAATCAGCATAATCCTCTTCGTTCAATCATGTCGACAAAAGAAGCATTCATTTTGA 1221 0.3448 ILMNARNPMIVSSRKNALTFLQELPLFLPIWIQRRWCGYLTTSRGNLLWILDIEEKKKLIKLKVQFFQQLAKYRSTEITKIFTLEELKETSKNFDEGMVLGQGGQGTIYKGILPNDRVVAIKRSRIFNPNQIENFINEVMMLSQINPRNVTLGCCLESEVPLLVYEFIPNGTVYEHLHDHGQFLRLTWKIRLQIATETAGVLACLPLHQLYIDVKTENILLDYNLTAKVSDFGVSRIIPLDQTQLTTLVNGTLDQLTEKGDVFGFGVVLVELLTGKKALSFDRPEPHRNLAVYFHSVTQDCNIIMIYKFILYVVFLVVMDKGRFPRIIDIHIIDEANDVANIAEYYLKFKGEERTTMKKVAKELESISIMEKPNWKKINLTLEETNFSQISIILFVQSCRQKKHSF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00754 406 Gene3D Transferase(Phosphotransferase) domain 1 168 386 - -
Pste4g00754 406 SUPERFAMILY Protein kinase-like (PK-like) 74 365 IPR011009 -
Pste4g00754 406 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 48 368 IPR045274 GO:0007166
Pste4g00754 406 SMART serkin_6 94 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00754 406 Pfam Protein tyrosine and serine/threonine kinase 98 277 IPR001245 GO:0004672|GO:0006468
Pste4g00754 406 ProSiteProfiles Protein kinase domain profile. 94 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00754 406 Gene3D Phosphorylase Kinase; domain 1 68 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00754 Pste-Chr4 5849735 5851332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00754 49 375 Receptor kinase-like Gene Family AT3G25490 43.611 1.31e-87 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste4g00754 PK_Tyr_Ser-Thr 1.3e-20 CL0016