Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00745 CATCTCTCTTGTGAATTTGTGATCAGATCACCCAATCTTAATTAAATTTCAAATGTGCGTGCTTTTAAGAGAGAAAAACAAGAATAGGAAAACCAATTAAAGGAATAGTATCAAGTACTTTTTGAAAACCACACAGCTTATTTGGACCGCATCTACATTTTCACCAGCATAGAGGATATTACAACCCAACGGCTACACCCTGAAGGAGCTTACAAGTTTGTGCTCAGAAATAGAAATTGAGCTGTGCAAAGTAGTCACGATGGCCAGAACTCCTTGTTGTGAGAAGATGGGCTTGAAGAAGGGGCCTTGGACACCAGAAGAAGATCACATATTGATTTCTCATATTCAACAATATGGCCATGGAAACTGGCGTGCCCTTCCAAAACAAGCTGGTTTGTTAAGGTGCGGTAAGAGTTGTAGACTTCGATGGATAAATTACTTAAGACCAGATATTAAAAGGGGGAAATTCAGCAAGGAAGAAGAAGAGATCATCCTCAAACTCCATGGAATTCTTGGAAATAGATGGGCAACTATTGCATCAAGATTGCCAGGACGAACTGACAACGAAATAAAGAATTTTTGGCACACCCATTTAAAGAAGAGAGTGGAGAGAAGTAAAGTGCAGAGTACTAGTATTATGCACACCTCCTCTAATCCATTGCAAGCAGCTTCTAGTGCAGAGAATTTAATAAATATGCCACAAGTAACTGTGGAAACTTCGGGTGCCACTAGTGTCACAGGGAAAGTGTTGATTGCCAATGATAATGTACTCTTGAGGAGAAATCCATCTTTTGTAGGTCTAGGATTCTATGGCGCCGTCTCTTCAGATATTTCAGGAGAAATAATTGGCAATAATTCGCATTGTGAGATTGGTGAAGAAATGGAATTTTGGTATAATATGTTTATGAACAGTCATCACAAGGGTGCCAAAATGTAA 937 0.3927 MARTPCCEKMGLKKGPWTPEEDHILISHIQQYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEEIILKLHGILGNRWATIASRLPGRTDNEIKNFWHTHLKKRVERSKVQSTSIMHTSSNPLQAASSAENLINMPQVTVETSGATSVTGKVLIANDNVLLRRNPSFVGLGFYGAVSSDISGEIIGNNSHCEIGEEMEFWYNMFMNSHHKGAKM 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00745 225 CDD SANT 69 112 IPR001005 -
Pste4g00745 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste4g00745 225 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste4g00745 225 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pste4g00745 225 CDD SANT 16 61 IPR001005 -
Pste4g00745 225 Gene3D - 13 66 - -
Pste4g00745 225 FunFam MYB-related transcription factor 13 66 - -
Pste4g00745 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste4g00745 225 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste4g00745 225 Gene3D - 68 140 - -
Pste4g00745 225 SMART sant 13 63 IPR001005 -
Pste4g00745 225 SMART sant 66 114 IPR001005 -
Pste4g00745 225 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste4g00745 225 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Pste4g00745 225 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00745 Pste-Chr4 5784901 5786159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00745 1 215 MYB Transcription Factor Family AT2G31180 45.161 1.00e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g00745 Myb_DNA-binding 6.2e-15 CL0123