Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00742 AAATACAACTATCGTATTAGCCTCTATTTCTTCATGAAAATGAAGCACTTTTCTTTCACGTTACTTGCATATTCTTCTGTATATCTCCACTTGGTTTCTCTTTTTGCATTCAACTCACTATGTTTTGTTCCAAATACCGCCTTTGTATTAGGAAATGAGACTGATTATTTGGCATTGTTCAAATTCAAACAATCCAGATTCAGTGATCCATATCGAATCTTCTCCTCTTGGAATAGTTCTACTCATTTTCGTAATTGGCATGGAATTACATGCAATCCCATGTTTCAAAGAGTTACAGAGTTGAACTTGCCAACATACAAGCTGGAGGGATTCATATCTCCTCACATTGGCAATCTCTCTTTTTTGAGAAACCTCAACCTTGCAAACAACAACTTCTATCCAAAACAACTCGTTGGGAAAATCCCTACAAATTTAACTGGTTGCACCGACCTCAAGCACTTATACTTATATTTGAGCTATTTGGTTGGCAATATACCAATTGAAATTCGTTCACTTAAGAAGCTTGAACATTTGAATATTGCTCTTAATCAACTTAGTGGAGTTGTCCCATCATTCATAGGTAATCTTTCATCCCTAACTATGTTCTCGATTTCTAGAAACAATTTAAAGGGAGATATTCCACAAGAAATATGCAATCTCAAAAGTTTAACATTTATAGCATTGGCTATCAACAATTTGACTGGAATATTACCTTCCTGTCTTTATAACATGTCATCTTTAACTGACGTCTCAGTTACAGCAAATCAATTTTATGGGTCTCTTCAACCCAACATGTTCAACATGTTTCTGAATCTCCAAGTATTTGAATGTGGAGGCAATCAAATCTCAAGGTCAATCCCATTTTCTATCACATATGCGTCTATACTTTCAATACTTGATATCGGTACAAACTATTTCATTGGAAAAGTTCCAAGTCTAGGGAAGTTGCAAAATCTTCGACATCTATCTTTGTTAATAAATAATCTAGATTACAATTCAATTAATGATTTGAAGTTTTTAATGTTAGATTTGTCAAAAAATTCTAATATTTGTCAAAAAAATTCATTGAGTGGTAATATCCCCAAAGAAGTGGGTAGGCTTAAACATATCAATTTGCTAGATGTATTTCAGAATAATCTATTTGGAGTCATACCAACCTCTTTGGCATCACTCAAAGTTCTTCAACATCTCGACCTCTTGCGAAACAACTTGATTGGATTAATTCCTAATGTACCAAGTGAAGGTGTCTTTCAAAATGTAAGCGGGTTAGTGGAGACCGGAAACAATAATCTTTGTGGAGGTATTCTTGAATTGAACCTACCACCATGCCTTGTTAAATATAAGAAACATGCAAAACACAACAAGTTTAAGTTGGTAGCAGTGATAGTTAGTGCGATTGTTTGTCTTCTTATATTGTCAATTATCCTAACTATCTATTGGATGAGGAAAATGACCAAAAAATCATCTTTGGATTCACCAACAATTGATCAAATGCCTAAAGTTTCATACCAAACCCTACATAATGGATTCTCAACTATAAATTTGATAGGGTCTGGAAATTTTAGCTCTGTCTACAAAGGAATTATTGAGTTAGAAGAGAATTTTGTTGCTATAAAGGTCCTAAAAGTTGAAAAAAAGGGTGTTCACAAGAGTTTCATTGCTGAATGTTATGCTTTTAAAAATATTAAACATCGAAATCTGGTTCAAATTTTTAGTGTTGTTCCAGTACAAATTACAAAGGTCAAGAATTTAAATTTAGAGCAATGGATGCATCCTATGACACTAAATGTGGAGCACTCAAGAGCATTGAACCTTGATCAGAGATTAAATATCATGATTGATGTTGCTTCTGCATTACATTATCATCATGATGAATGCGAACAATCAATCATTCATTGTGATTTAAAACCAAACAATGTCCTTCTTAATGATGACATGGTTGCTCATGTTAGTGATTTTGGCATAGCAAGACTTCTTTCAACCATTAATCATAAAACTTTTAAGCAAACAAGTACAATTGGAATAAAGATACTTATATTGGAAATGTTATCTGAAAAAAGGCCTACAGAGGAAATCTTTAAAAATGGTAAAATTTTTCAGAACTTTGTTGTAGTTTCTTTTCCAGATAATGTTCAACAAATTTTGGATCCAAGACTTATTTCAACATTAGAAGGAAATTATGGGAATCTTGATCCAAATGTTGAGAAGGGCTTAGTTTTACTTTTTAAAATTGGACTTGCTTATTTTGTGGAATCACCGAAAAAAAGAATGAACATGATTAATTTTACCAGAGAGCTTAACCAAATAAAAAAG 2313 0.3281 KYNYRISLYFFMKMKHFSFTLLAYSSVYLHLVSLFAFNSLCFVPNTAFVLGNETDYLALFKFKQSRFSDPYRIFSSWNSSTHFRNWHGITCNPMFQRVTELNLPTYKLEGFISPHIGNLSFLRNLNLANNNFYPKQLVGKIPTNLTGCTDLKHLYLYLSYLVGNIPIEIRSLKKLEHLNIALNQLSGVVPSFIGNLSSLTMFSISRNNLKGDIPQEICNLKSLTFIALAINNLTGILPSCLYNMSSLTDVSVTANQFYGSLQPNMFNMFLNLQVFECGGNQISRSIPFSITYASILSILDIGTNYFIGKVPSLGKLQNLRHLSLLINNLDYNSINDLKFLMLDLSKNSNICQKNSLSGNIPKEVGRLKHINLLDVFQNNLFGVIPTSLASLKVLQHLDLLRNNLIGLIPNVPSEGVFQNVSGLVETGNNNLCGGILELNLPPCLVKYKKHAKHNKFKLVAVIVSAIVCLLILSIILTIYWMRKMTKKSSLDSPTIDQMPKVSYQTLHNGFSTINLIGSGNFSSVYKGIIELEENFVAIKVLKVEKKGVHKSFIAECYAFKNIKHRNLVQIFSVVPVQITKVKNLNLEQWMHPMTLNVEHSRALNLDQRLNIMIDVASALHYHHDECEQSIIHCDLKPNNVLLNDDMVAHVSDFGIARLLSTINHKTFKQTSTIGIKILILEMLSEKRPTEEIFKNGKIFQNFVVVSFPDNVQQILDPRLISTLEGNYGNLDPNVEKGLVLLFKIGLAYFVESPKKRMNMINFTRELNQIKK 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00742 771 Gene3D Phosphorylase Kinase; domain 1 498 577 - -
Pste4g00742 771 Gene3D Transferase(Phosphotransferase) domain 1 676 771 - -
Pste4g00742 771 Gene3D Ribonuclease Inhibitor 213 313 IPR032675 -
Pste4g00742 771 SMART serkin_6 510 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00742 771 Pfam Leucine rich repeat N-terminal domain 53 92 IPR013210 -
Pste4g00742 771 ProSitePatterns Protein kinases ATP-binding region signature. 516 539 IPR017441 GO:0005524
Pste4g00742 771 SUPERFAMILY Protein kinase-like (PK-like) 495 692 IPR011009 -
Pste4g00742 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Pste4g00742 771 Gene3D Ribonuclease Inhibitor 52 212 IPR032675 -
Pste4g00742 771 PANTHER OS04G0122200 PROTEIN 219 341 - -
Pste4g00742 771 ProSiteProfiles Protein kinase domain profile. 510 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00742 771 Gene3D Transferase(Phosphotransferase) domain 1 581 675 - -
Pste4g00742 771 Pfam Protein kinase domain 511 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00742 771 Pfam Leucine rich repeat 174 233 IPR001611 GO:0005515
Pste4g00742 771 Gene3D Ribonuclease Inhibitor 353 434 IPR032675 -
Pste4g00742 771 FunFam Nuclear pore complex protein NUP107 52 209 - -
Pste4g00742 771 SUPERFAMILY L domain-like 77 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00742 Pste-Chr4 5772531 5777957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00742 143 771 Receptor kinase-like Gene Family AT3G47570 34.993 3.37e-104 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste4g00742 Pkinase 2.4e-24 CL0016