Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00732 ATGGTTTCTCCTTGTCATTGCTTCTTATTCACAAATCAAGGGCAGTTGAAATTATACACTGATGAGCAATTTTCCCGAGGAAGGTTTGTCACTAATGTGGAATTCTTGCAACGATATATGAGGATAAGTTTGGGTATGAATGAAAATAATGAACTATCAAAAACTACTCCCAGGAGTGGGAAAGTTCCCACCCAGGAGGGAGGGCAGCAGAGACTCAGTTATTTTGCATGTCAGCCAGAGACAGCAGTTGTCAGAGATAAGCGGACTGGTAAAACAAAAGGTTATGGATTTGTGAGCTTTGCCAATCCTTCTGACCTTGCTGCTGCTCTTAAAGAAATGAATGGTAAGTATGTTGGAAATCGGCCAATAAAACTACGCAAGAGTAAGTGGAAAGAGAGGACAGATTATGAAGCGCTGGAGAAACAGAAGAATCACATTCAAAAGAAACCGAAAATGCCAAGGAAAGGTGTGCTGCACAAGTGACAAAGGCCAGAGTCTGTAAATCGGGCTTACCAACCTGACTAATAGACATTGTTTACAGAATGTTATTTCTCTTCAACCGAAATGTATTATCCGTACCAAAAAGAAGGCCCCCTTCAGATATTTCTTTCCATGGAACTGTTGCTAAACACTCAAGTTGTTGGTATTTTAAGATGTACGGACATTACAAAAAAATCCTTACATTTCAGGAATTCGTGCAGTCGATTTACAGGCATGAGGAAGAAAACTTGGAAAATGTATAAAATTTGACTCACTGCTTTTTTAATAGATGAAAAAATATTAGATTGTGTACTCATGTTTGCCGGTGCTTACTTTGGAGTGTGTAGTCAAGTTGGTGCTTAGTGGAGTAGTTCTTCTCTATGAATTTATTTTTCTAAATCGTTGGTAATTGATTCGTTTTGTTTATTGCTCTAAACAGTGTCGTATTTTGGTTGGGTCTCAACAACAACGCACATATGTGTTTAGTTCAACAGTTTTCAAATACACACCCTAT 994 0.3833 MVSPCHCFLFTNQGQLKLYTDEQFSRGRFVTNVEFLQRYMRISLGMNENNELSKTTPRSGKVPTQEGGQQRLSYFACQPETAVVRDKRTGKTKGYGFVSFANPSDLAAALKEMNGKYVGNRPIKLRKSKWKERTDYEALEKQKNHIQKKPKMPRKGVLHK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00732 160 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 26 130 IPR000504 GO:0003723
Pste4g00732 160 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 83 124 IPR000504 GO:0003723
Pste4g00732 160 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 82 140 - -
Pste4g00732 160 SUPERFAMILY RNA-binding domain, RBD 83 134 IPR035979 GO:0003676
Pste4g00732 160 Gene3D - 75 155 IPR012677 -
Pste4g00732 160 SMART rrm1_1 41 126 IPR000504 GO:0003723
Pste4g00732 160 MobiDBLite consensus disorder prediction 139 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00732 Pste-Chr4 5678400 5680571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00732 90 142 Eukaryotic Initiation Factors Gene Family AT1G22760 41.818 1.68e-07 47.8