Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste4g00728 | ACAGAGAGAGAGAGAGAGAGAGAATGTGCGAAGCCCTGAAAACACAGTACCAGGTGAGCGAGGAGATCGGTCGGGGTCGGTTCGGCACCATCTACCGCTGTTTCGACCCACTGTCCAACGAACCCTACGCCTGCAAAGTCATCGACAAGTCTCTACTCCAAGACTCAACCGACCGCGAATGCCTCCAAAATGAACCAAAATTCATGACCTTACTTTCCCCTCACCCCAACATCATTGGAATCTACGATGTCTTCGAAGACGATCAGTATCTTTCAATGGTGATGGACCTGTGCGAGCCCCATACACTGTTCGACCGAATTGTTAATGGGCCGATCCCAGAGGCGCAGGCGGCGGCCTTGATGAAGACCCTTCTGGAAGGAGTGGCGCACTGCCACCGCCGGGGCGTGGCCCACCGCGACATCAAACCGGACAATATTCTGTTCGACTCGGGGGAGAATATGAAACTGGCGGACTTTGGTTCGGCGGAGTGGTTCGGAGATGGGAGGAGCATGAGTGGTGTGGTGGGGACGCCGTATTACGTGGCGCCGGAGGTTGTGTTGGGGAGGGAGTACGATGAGAAAGTAGATGTTTGGAGCTGTGGTGTGATATTGTATATAATGTTGGCTGGGATTCCCCCTTTTTACGGAGACTCTGCTGCCGAGATCTTTGAGGCTGTGGTTAGGGCTAACCTTAGGTTCCCCTCAAGAATCTTCCGTAACGTCTCCCCCGCCGCCAAGGATCTCTTGCGAAAACTTATCTCTCGGGACTCTTCTAGAAGGTTCTCTGCGGAACAAGCCTTGAGGCACCCTTGGATTCTCACTGCTGCTCAATCGCCTCATCTCACTTCCGAATCCCCTCTGTCACAATAAGCTCTACTCTTCCCGGCAGAGGCTTCTGTAAATTCTCGCCATTTTTTCTTTCAGGAACCTCAGACTCCACACAATCTTTTTTTCCACTCTCCGTGATTTTCTCTCTCTGCAGAAACTGAGAAAGTGGATCATCTCCCACGCTCCCCCTAGTAGATACAGGAGTTATTTTCTATATGTAATTATCTTAATAAAGCAGTTTTTAGTCTATGTAAATGCGGTTCAATCTTC | 1097 | 0.5087 | MCEALKTQYQVSEEIGRGRFGTIYRCFDPLSNEPYACKVIDKSLLQDSTDRECLQNEPKFMTLLSPHPNIIGIYDVFEDDQYLSMVMDLCEPHTLFDRIVNGPIPEAQAAALMKTLLEGVAHCHRRGVAHRDIKPDNILFDSGENMKLADFGSAEWFGDGRSMSGVVGTPYYVAPEVVLGREYDEKVDVWSCGVILYIMLAGIPPFYGDSAAEIFEAVVRANLRFPSRIFRNVSPAAKDLLRKLISRDSSRRFSAEQALRHPWILTAAQSPHLTSESPLSQ | 281 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste4g00728 | 281 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 6 | 269 | - | - | |
| Pste4g00728 | 281 | CDD | STKc_CAMK | 8 | 263 | - | - | |
| Pste4g00728 | 281 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 128 | 140 | IPR008271 | GO:0004672|GO:0006468 | |
| Pste4g00728 | 281 | FunFam | Phosphoenolpyruvate carboxylase kinase 1 | 1 | 91 | - | - | |
| Pste4g00728 | 281 | ProSiteProfiles | Protein kinase domain profile. | 9 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste4g00728 | 281 | Gene3D | Transferase(Phosphotransferase) domain 1 | 93 | 280 | - | - | |
| Pste4g00728 | 281 | SMART | serkin_6 | 9 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste4g00728 | 281 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 91 | - | - | |
| Pste4g00728 | 281 | FunFam | Phosphoenolpyruvate carboxylase kinase 2 | 1 | 275 | - | - | |
| Pste4g00728 | 281 | Pfam | Protein kinase domain | 9 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste4g00728 | 281 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 272 | IPR011009 | - | |
| Pste4g00728 | 281 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste4g00728 | Pste-Chr4 | 5645627 | 5646806 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste4g00728 | 9 | 274 | EF-hand Containing Proteins | AT5G19450 | 44.444 | 5.03e-77 | 241 |
Transcription factors information