Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00718 ATGGAGATAGCTGGAGGGGCGGACATAGCCGATTGCGTGGCGCAGTTCGCGCGTAGGCGCCAGCGAGGCGTGTCCATACTAAGCGGAAGCGGCACCGTGGTGAACGTGACCCTCCGGCAGCCGACGACGGCAGGCGCAGTCATGGCCCTCCAGGGGCGCTTCGACATCCTCTCCCTGACGGGCTCCTTCCTCCCTGGTCCGTCCCCTCCCGGCGCCACCGGCCTCACCATCTACCTCGCGGGAGGGCAGGGTCAGATTGTCGGCGGCGGGGTGGTGGGCCCCCTGGTTGCGGCGGGTCCCGTTTTGATAATGGCGGCCACTTTTTCGAATGCTACTTATGAAAGATTGCCCCTGGAGGACGATGATCAGGAGCACGGGTGCGGCGGCGGCGGCGGCGGCGGCGGCTCTCCCCCTGGTCTGGCTGGTGCTCCCTGCGAGGCTTCTTCTTCCATTTCAGTTTACAACAACAATGTTCCTCCGAATTTGGGTGTTCCCAATGGGCAGCATCTCAACCATGAAGTATATTCTTCTCCTTGGGGTCATGCTCCTCATGCCAGACCTCCTTTCTGA 570 0.6263 MEIAGGADIADCVAQFARRRQRGVSILSGSGTVVNVTLRQPTTAGAVMALQGRFDILSLTGSFLPGPSPPGATGLTIYLAGGQGQIVGGGVVGPLVAAGPVLIMAATFSNATYERLPLEDDDQEHGCGGGGGGGGSPPGLAGAPCEASSSISVYNNNVPPNLGVPNGQHLNHEVYSSPWGHAPHARPPF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00718 189 CDD DUF296 2 80 IPR005175 -
Pste4g00718 189 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 181 IPR014476 GO:0003680
Pste4g00718 189 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 121 - -
Pste4g00718 189 FunFam AT-hook motif nuclear-localized protein 1 123 - -
Pste4g00718 189 Gene3D - 1 125 - -
Pste4g00718 189 ProSiteProfiles PPC domain profile profile. 1 133 IPR005175 -
Pste4g00718 189 MobiDBLite consensus disorder prediction 119 144 - -
Pste4g00718 189 Pfam Plants and Prokaryotes Conserved (PCC) domain 1 110 IPR005175 -
Pste4g00718 189 PIRSF ESCAROLA 1 189 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00718 Pste-Chr4 5554916 5555485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00718 1 189 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 57.895 4.32e-56 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00718 4 5554916 5555485 Pste4g00718 4 5554916 5555485 ECH