Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00717 ATATTAATGAATGCAAGCAATCCAATGATTGTATCCAGTAGAAAAAATGCATTAACTTTCCTCCCAGGAGCTACCGTTGTTCTTGCCCATATGGATACAAAGGAGATGATGCATCAAGAAAAAAGAGATAATAAATTTCTTTTCAATTGTTTATATCAAGGTGTGGGTGTAGGTATCTCAATACTTCTAGGGGGAATCTTTTATGCATATTGGACATTGAAGAAAAAAAAACTCATCAAACTTAAAGTGAAATTTTTTCAACAACTAGCCAAGTATAGGTCGACTGAAACAACTAAAATCTTTATGCTAGAGGAACTAAAGGAGACTAGTAAAAATTTTGATGAAGGCATGGTCTTAGGCCAAGGTGGGCAAGGAACAATTTACAAAGGAATATTACCTAATGATAGAGTTGTAGCAATAAAAAGATCCAGAATTTTCAACCCGAACCAAATTGAGAATTTCATCAATGAGGTGATGATGCTTTCTCAAATCAACCCTAGGAATGTGGTAAAACCCTTGGGATGCTGTTTAGAATCAGAAGTTCCCTTACTTGTTTATGAATTTATTCCCAATGGTACTGTTTATGAACATCTTCATGATCATGGTCAATTTTTAAGACTTACATGGAAAATAAGATTGCAAATAGCAACAGAAACTGGTGGAGTCTTAGCATGCTTAGATTCAGCTACCTCTACACCAATATACATAGATGTAAAAACTGAAAATATACTACTTGATTACAATCTCACTGCTAAGGTTTCTGATTTTGGAGTTTCAAGTAAATTAACAGAGAAGGGTGATGTGTTCAGCTTTGGAGTTGTCTTAGTGGAATTGCTAACAGGAAAGAAGGCACTTTCTTTTGATAGGCCAGAGCCTCATAGAAACCTTGCAGTGTACTTTCATTCTGTTACTCAAAATTGTAATATTATCATGATTTACAAATTTATTGTTACTCAAAATTTATATGTTGCATTCCTTGTTGTGATGGATAAGTGTAGGTTACCTAGAATTATAAATATCCATATAATAGATGAGGCAAATGATGAGTAA 1050 0.3371 ILMNASNPMIVSSRKNALTFLPGATVVLAHMDTKEMMHQEKRDNKFLFNCLYQGVGVGISILLGGIFYAYWTLKKKKLIKLKVKFFQQLAKYRSTETTKIFMLEELKETSKNFDEGMVLGQGGQGTIYKGILPNDRVVAIKRSRIFNPNQIENFINEVMMLSQINPRNVVKPLGCCLESEVPLLVYEFIPNGTVYEHLHDHGQFLRLTWKIRLQIATETGGVLACLDSATSTPIYIDVKTENILLDYNLTAKVSDFGVSSKLTEKGDVFSFGVVLVELLTGKKALSFDRPEPHRNLAVYFHSVTQNCNIIMIYKFIVTQNLYVAFLVVMDKCRLPRIINIHIIDEANDE 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00717 349 ProSiteProfiles Protein kinase domain profile. 113 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00717 349 SUPERFAMILY Protein kinase-like (PK-like) 87 286 IPR011009 -
Pste4g00717 349 Gene3D Phosphorylase Kinase; domain 1 87 188 - -
Pste4g00717 349 SMART serkin_6 113 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00717 349 Gene3D Transferase(Phosphotransferase) domain 1 189 262 - -
Pste4g00717 349 Gene3D Transferase(Phosphotransferase) domain 1 263 333 - -
Pste4g00717 349 Pfam Protein tyrosine and serine/threonine kinase 117 263 IPR001245 GO:0004672|GO:0006468
Pste4g00717 349 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 38 315 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00717 Pste-Chr4 5542341 5543746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00717 99 300 Receptor kinase-like Gene Family AT3G25490 52.381 4.87e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste4g00717 PK_Tyr_Ser-Thr 2.1e-20 CL0016