Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00711 GGAGGATGTTTGACGCGTAGCACAGAGCATTGAAGACAACTGTAGGATGGACGATGCTGAAGCAGAGCAGGGAGGCAAGCTTGGTTTAGGATTTAGGATTGGGTTCAGGAACTTGATAGTTTATAATTCTCCATGCTTGGGCCCCACTCTCTAAACTCTGCTATATGCTTTCCTTTTCTTTTCTAAGAACCAAAATAAGAAAAGGGAAGATCTTCAAAACATTTCACTCTGCTCGATCTGCGTGCTGTTACTTTGGTACGCTCCCTCAACCCTTCACTTTTGCCTCTTGTTATGAGATTTGTGAATATTAGGGAATTTTTGGTGGGTGGTTTTCAAAACCCACTTACCTTGTCCTTGTGCCATGGAAACTCCTTTTCTTCTTTTCTTCTTTTCTTATCTTATTCACTTTGCTTCTGCTACCGATGTCGAATTTGACAATTGCAACTGTGATGATGGGGAAGGGATTTGGAGCATACATAGCATTCTTGTTGGCCAAAAAGTCAGTGATTTTTTCATTGCCGTTGCTTATTTTTCCATACCCATTGAACTCCTTTACTTTGTTAGCCGTTCTAACGTCCCATTCAAATTGTTGTTCCTTCAATTTATCGCCTTCATAGTGCTCTGTGGTTTGACCCATTTACTCAATGCATATTCTTATCATGGCACCCCCTCCTTCCAGTTGTTGCTCTCCCTAACCGTTGCTAAATTCCTCACTGCCCTTGTTTCCTGTGCAACGGCTTTGACCCTTCCTCCTCTCATTCCTCTTCTCCTCAAAATCAAAGTCAGGGAGCTTTTTCTAAGGCAGAATGTGATGGAGTTGGGCCAAGAGGTTGGGATGATGAAGAAACAGAAGGAGGCAAGCTGGCATGTTAGGATGCTCACAAGGGAAATTAGAAAGTCTCTTGATAAGCACAACATCTTGTACACCACTCTTGTTGAGCTTTCAAAGGCGTTGGATTTGCATAATTGTGCAGTTTGGATGCCCAATGATGACCGGCGAGAGATGCATTTAACTCATGAGTTGAAAACAAACTCTGCCAAGAATTTTCAGAACTCGATACCTGTGAACGATCCTGATGTATTGGAGATAAGAAAGACTAAAGGGGTGAGGATTTTGAGGCCTGATTCTGCTCTAGGAGCAGCAAGTAGTGGTGGCTCTGAGGAGTTGGGTGCTGTGGCGGCTATTCGCATGCCGTTACTTCATGTGTCAAATTTCAAAGGAGGGACACCAGAGTTTGTTGAGACTTGTTATGCTATACTGGTTTTGGTTCTTCCAAGTTCAAGCCCTAGAGTTTGGACCTACCATGAGATGGAGATAGTTGAAGTGGTTGCTGATCAGGTGGCTGTTGCCCTGTCTCATGCGTCTGTTCTTGAAGAGTCTCAACTGATGAGGCAGAAGCTGGAAGAGCGGAACTGGGCATTGCAACAGGCTAAAAGAATGCAATGATGGCCAGCCAGGCAAGGCAGTCATTTCAGAAGGTCATGAGCCATGGAATGCGGAGGCCCATGCATTCTATTCTGGGTATGCTTTCATTGTTTAATGAGGATAATTTGAGGTCTGAGCAGAAGATTATTGGTGATACAATGTTGAAAGTTGGCCATGTGCTCTCAAGTTTGATTAATGATGTAATGGAGATTTCAGAAAATGAAAAGGGAGGTTTCCGGTTAGAGATGAAACCTTTCCTACTGCACTCTATGATGAGGGAAGCTGCTTGCATTGCCAAGTGCTTCTGTGTTTACGAAGGCTTTGGTTTTGAAATTGATGTGCAGAAGTCTTTGCCTGAAGTAGTTATGGGTGATGAGGCAAGGACTTTTCAAGTCATTTTACACATGATTGGCTATTTATTGAGCATGAATGACAGAGGGACTCTCAATTTTCGAGTTTTTCTTGAAAATGATGGTGGAGATAGGGATGACAAAAATTTTGGAATATGGAGATTAAGCAGTCAAAATGAGTATGTACATATAAAATTTGATTTTCAGATTATTGATAGTTCTCAGTCAGACAAAGCAATTTCAACAATAGATTATCCTGGTAGGAGGCAGTACCACAACAATGAACCTAAGAATGGCCTGAGCTTCAGCATTTGCAAGAAGTTGGTACAGATGATGCAAGGTAATATATGGATATCACCCAACTCCCTGGGTTTGGTGCAAGGCATGACACTTCTTCTCAAGTTTCAGATAAAAGCATCAGTTGAAAAATCCATATTTGCAGCTAAAGATTTTTCAAACTCACAGTTCAGAGGGCTTAAGGTTGTGTTAGCCGAGGATGATGGTGTAAACAGGACGGTGACCAAGAAGCTACTTGAGAAGCTTGGTTGTCAAGTAACTGCAGTCTCATCTGGGTTTGAGTGTCTTAGTGCTATAAGTGGCGCTGGTAACTCATTCAGAATTATCCTGTTGGATCTTCACATGCCCGAAATAGATGGTTTTGAAGTGGCAAAGAGGATCCGGAAGTTCCATAGCCGTAGTTGGCCCTTGATTATAGCTCTTATAGCAAGTGCTGAAGAACATGTAAGGGAGAAATGCCTACTTGCAGGAATGAATGGATTGATCCAAAAACCTATCGTCCTTCATCAGATAGCAGACGAACTTAGAACCGTCCTACAAAGAGCTGGTGAAAAACTGTGAAAACAGTTTTGTAAAAGAATGCTTGGTTTCAGAAAATATGATTCCATTAATAATTACAAAAATTTCATGTTATTTTTGTTTTGTTGCCTATTTTCAAGCTACGCTTTGCTTTTCTTATTTTATTAACAAGTTCTTGAAAATTAGAAACAAAATAAAATAATGTGTCTTCTATAATCTATAATTATTAATGAAAGCTCGAAATATTTTCTGAAATCAAA 2852 0.4095 MMASQARQSFQKVMSHGMRRPMHSILGMLSLFNEDNLRSEQKIIGDTMLKVGHVLSSLINDVMEISENEKGGFRLEMKPFLLHSMMREAACIAKCFCVYEGFGFEIDVQKSLPEVVMGDEARTFQVILHMIGYLLSMNDRGTLNFRVFLENDGGDRDDKNFGIWRLSSQNEYVHIKFDFQIIDSSQSDKAISTIDYPGRRQYHNNEPKNGLSFSICKKLVQMMQGNIWISPNSLGLVQGMTLLLKFQIKASVEKSIFAAKDFSNSQFRGLKVVLAEDDGVNRTVTKKLLEKLGCQVTAVSSGFECLSAISGAGNSFRIILLDLHMPEIDGFEVAKRIRKFHSRSWPLIIALIASAEEHVREKCLLAGMNGLIQKPIVLHQIADELRTVLQRAGEKL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00711 396 CDD HisKA 4 66 IPR003661 GO:0000155|GO:0007165
Pste4g00711 396 Gene3D - 70 253 IPR036890 -
Pste4g00711 396 Pfam Response regulator receiver domain 272 384 IPR001789 GO:0000160
Pste4g00711 396 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 75 232 IPR036890 -
Pste4g00711 396 Gene3D - 270 395 - -
Pste4g00711 396 FunFam Ethylene receptor 268 392 - -
Pste4g00711 396 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 1 393 - -
Pste4g00711 396 SMART REC_2 270 385 IPR001789 GO:0000160
Pste4g00711 396 SMART HisKA_10 6 71 IPR003661 GO:0000155|GO:0007165
Pste4g00711 396 Pfam His Kinase A (phospho-acceptor) domain 7 70 IPR003661 GO:0000155|GO:0007165
Pste4g00711 396 Gene3D - 1 69 - -
Pste4g00711 396 SUPERFAMILY CheY-like 266 391 IPR011006 -
Pste4g00711 396 ProSiteProfiles Histidine kinase domain profile. 13 250 IPR005467 -
Pste4g00711 396 ProSiteProfiles Response regulatory domain profile. 271 389 IPR001789 GO:0000160
Pste4g00711 396 CDD REC_ETR-like 270 385 - -
Pste4g00711 396 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 3 71 IPR036097 GO:0000155|GO:0007165
Pste4g00711 396 CDD HATPase_ETR2_ERS2-EIN4-like 112 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00711 Pste-Chr4 5510104 5515025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00711 1 394 Miscellaneous Gene Families AT3G04580 54.568 3.90e-155 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste4g00711 Response_reg 1.9e-18 CL0304