Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00706 ATGACTTCTGTATCTTGCTCAGCAAACGACCTCGCCCCACTCTTGAACGACACAGCAGCCGCAAGGTACCTCTGTAGCCAGTTGGATTACATTTCAAAGAAAGTGGCGGACACCACCTATGCGGTGGACAACACGTTCCTGCTCTTCTCAGCCTATCTGGTATTCGCCATGCAGCTGGGCTTCGCCATGCTATGCGCAGGCTCCGTCAGAGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCAGCAGCAGGTGGCCTCTCCTACTACCTCTTCGGTTTCGCATTCGCATTCGGCTCCCCTTCCAACGGCTTCATAGGGCGCCACTTCTTCGGCCTCAGGGATTACCCAATTTCCGCCTCTCCTAACGACGACTACAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATAGCCGCAGCAGGCATCACCAGCGGCTCCATCGCCGAGAGAACGCAGTTCGTAGCCTACCTCATCTACTCTTCCTTCTTAACCGGCTTCGTTTACCCCATCGTTTCCCATTGGTTCTGGTCCTCTGACGGTTGGGCCAGCGCCTCTCGTACCGACGGCAACGTCTTGTTCGGCTCCGGAGTCATTGACTTTGCCGGTTCCGGCGTCGTTCACATGGTTGGCGGTATCGCCGGCCTCTGGGGGGCTTTCATTGAAGGCCCCAGAATCGGCCGCTTCGACCGCTCTGGCCGCAAAGTCTCTTTACGTGGTCATAGCGCCTCTTTAGTTGTTCTTGGTTCCTTTTTATTGTGGTTCGGCTGGTACGGCTTCAACCCTGGTTCCTTTATTACCATAGCCAAAGGCTATGGGAAACAGTCCTATTATGGTCAATGGAGCGCCATAGGAAGGACAGCTGTGACCACCACATTGGCTGGGAGCACCGCCGCTCTCACCACTCTCTTCAGCAAACGCTTATTGGTTGGCCACTGGAACGTCATTGACGTCTGTAACGGCCTGCTTGGCGGCTTCGCCTCCATCACCTCTGGCTGTGCCGTTGTCGAACCCTGGGCAGCCATCGTCTGTGGCTTTCTTTCCGCCTGGGTTTTGATTGGCCTTAATAAGTTGGCCGCCATGCTGGAGTATGATGATCCGTTGGAGGCGGCGCAGCTTCACGGCGGCTGCGGCGCCTGGGGGGTGTTGTTCACCGGATTCTTTGCTAAGAAGCAGTACGTGGAGGAGGTTTACGGCGTTGGGAGGCCCTACGGTGCTTTCATGGGCGGCGGTGGGAAGCTGCTGTCTGCGCAGTTGATTCAGATACTGGTGGTGAGTGGGTGGGTTACGGCGACGATGGCGCCCTTGTTCTATGGGCTTCATAAGTTGAAACTGTTGAGGATATCGAGCGAAGATGAGACTGCGGGAATGGATTTGACCAGGCATGGTGGCTTTGCTTATGCATACCATGATGATGAGGATGGTTCAAGCAAGGGACCTGGATTCATGATGCGTAGAATTGAACCCACCAGTGCAACTCCCTCTCCCCCCACTGCACAGCAAGTATGA 1515 0.5558 MTSVSCSANDLAPLLNDTAAARYLCSQLDYISKKVADTTYAVDNTFLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHFFGLRDYPISASPNDDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSSDGWASASRTDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRSGRKVSLRGHSASLVVLGSFLLWFGWYGFNPGSFITIAKGYGKQSYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVIDVCNGLLGGFASITSGCAVVEPWAAIVCGFLSAWVLIGLNKLAAMLEYDDPLEAAQLHGGCGAWGVLFTGFFAKKQYVEEVYGVGRPYGAFMGGGGKLLSAQLIQILVVSGWVTATMAPLFYGLHKLKLLRISSEDETAGMDLTRHGGFAYAYHDDEDGSSKGPGFMMRRIEPTSATPSPPTAQQV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00706 504 SUPERFAMILY Ammonium transporter 40 450 - -
Pste4g00706 504 Gene3D Ammonium transporter AmtB like domains 22 482 IPR029020 -
Pste4g00706 504 Pfam Ammonium Transporter Family 46 469 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pste4g00706 504 FunFam Ammonium transporter 24 484 - -
Pste4g00706 504 PANTHER AMMONIUM TRANSPORTER 17 465 - -
Pste4g00706 504 MobiDBLite consensus disorder prediction 478 504 - -
Pste4g00706 504 NCBIfam ammonium transporter 43 469 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pste4g00706 504 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00706 Pste-Chr4 5454901 5456415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00706 23 498 Inorganic Solute Cotransporters AT1G64780 80.457 0.0 792