Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00679 ATGAAATTGAGTTGTAATGGGTGTCGAATACTTCGTAAAGGTTGTAATGACAATTGCGTCATCAAGCCTTGTCTTGAGTGGATTAACTCTCCTGAGTCTCAAGCCAACGCTACCCTTTTCCTTGCAAAATTCTATGGTCGTACGGGCTTGCTCAACCTTATAACTGCTGCCCCTCAACACCTTGGCCCAGTTGTATTCAAGTCACTATTGTATGAGGCATGTGGGAGATTAGTGAATCCCACTTATGGGTCACTAGGTTTGTATTGGGCTGGGGAATGGGCTCGATGTGAAGCAGCGGTTGATGCTGTGCTATCTGGGTCTAAAATTAATGATCATATTCTCTCAACATGTGATATACGCTATATGCCAAAGAGGACCAATGTGGATGAAGTGAAAGGTAGAACTGAGTTCAAGCGAGTCAGAAAAGTTATGATCAAACCTAGAACGCAAGTGGGTTCAATTGACTTGACTTTATTGTGCAAAACCAATTGGAAGAGTGAGAGAACGCAATCCATGGAGACTTCATTTGCGAGCCAAGACAAGTTGAACCAAGCTGCTGAAACTGACTTGGACTTGGAACTCACCCTTGGCTTTCCTTGCCAGTCAACATATGCCAATTAG 621 0.4364 MKLSCNGCRILRKGCNDNCVIKPCLEWINSPESQANATLFLAKFYGRTGLLNLITAAPQHLGPVVFKSLLYEACGRLVNPTYGSLGLYWAGEWARCEAAVDAVLSGSKINDHILSTCDIRYMPKRTNVDEVKGRTEFKRVRKVMIKPRTQVGSIDLTLLCKTNWKSERTQSMETSFASQDKLNQAAETDLDLELTLGFPCQSTYAN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00679 206 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Pste4g00679 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 196 - -
Pste4g00679 206 Pfam Lateral organ boundaries (LOB) domain 4 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00679 Pste-Chr4 5157001 5157716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00679 1 192 AS2 family AT1G68510 48.454 9.67e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste4g00679 LOB 2.7e-21 No_clan