Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00650 AATCCGAAGAAAATTAATGGTGCAATTCAAGCTCGTAACCATAACCTTGTTGATGTTGTGGTCATCATGGTGGAGCTTTGAGGGTGCAGTAGGAGACCCTCAACTTTTTCTACTCAAATGGGAGTGCAGTGTTGTGTCAGTCCATGATTTGTCCAACTTCTACCAAAATATAAACGCTAGTTTGGAAGTGCTGAGAGAGAACATTAGCAACGAAAGAAAGCACTTTGCCACGGCTCAATCAACAAGTGGAACAGATCCTGTCTATGCTATGTTTCAGTGCAGGAACTACCTCTCCAAGGATGACTGCGCCGCCTGTTTAGCCGCCGCTGCCACCAGAATCCGTGGCTGCTCCACAGGGAACGGTGCCCATGTCATTTATGACGGATGCATCCTCAGGTACGAGAACAATGAGTTCTTAAAGCAGAATATCATTTCTAGCAGCCACACAATTTGTGGAAATGAGACTGCAGATGAAAGCACTGATTTTGGTGCAGTTGGACAACAAGTGCTGAAGGATCTAAAAATAGCAACACCCCAAATTAGTGGTTACTTTGCATCTACCAAGACACAAGTGGCTGGTGGTGCTATCTATGCCATTGCACAATGTGCTGAAGCTCTCACACAACAAACTTGTTTGGATTGTTTATCAATTGAGCAGAGTGGCATACAAGAGTGTCTTCCCAATACAGATGGTAGAGGAGTCAATCCTCCTGTGTGCTTTATGAGATACTCAGAAACACCCTTTTTTGCTGATAACCAAATCACTGATATTAGCCACTTCTTAAAACAAGGGGGAGGAGATTCATTGAAGAAGATGGTCGTTATTGGTGGTGGTGTTGCTGGTGCACTCCTTATTATAATATTCCTTATTTCAATAATATTTCCCAGGCATAGAGGATTCCAAAATCCAAAAAGAATTTCTAGAAGAGAAGGGGGTTTTGGTACTGTATACAAGGGGACCATGCCAAATGGGAAAGTTGTTGCAGTTAAAAGATTAATCACAGGAGATTCGAGCAAGATAAACGATGAATTTGAAAGGGAAGTAAAATTTATAAGTAATGTTAATCATATAAATCTTGCTCGGCTTCTTGGTTATTGCAGTAAAGGTGAAGAAAAAATTCTTGTTTACGAATACATGGCAAACAGTAGCCTAGACAAATTCTTATTTGGAAAAAGAAAAGGTTCTCTTAATTGGAAACAACGCTATGATATAATTTTGGGCACAGCAAAGGGATTAACTTATCTACATGAGGAATTTCACATTTCTATCATACATAGGGATATTAAGAGTGGCAATATCCTATTGGATGAACAACTTCAACCCAAAATTTCTGACTTTGGGTTGGTGAAACTCTTACCTGGGGACCAAACCCATCTTCACACCAGAGTTGCTGGAACATTGGGATACACAGCACCTGAGTATGTACTTCATGGTCATTTATCAGAAAAGGCAGACACATATAGTTATGGAATTGTAGTCTTAGAAATCGTAAGTGGTCGAAAGAGTACTGATGTGAAAGTTATTGATGATAATGGTGATGAAGAATATCTTCTTCGACAAGCATGGAATTTGTATGAGAAAGGAATGCTCTTAGAGTTAGTGGATAAAAGCTTAGACCCTAATAACTATGATGCTGAAGAAGTAAAGAAAGTCATAAGCATTGCTTTGTTGTGCACTCAAGCTTCTGCTGCAATGAGGCCAACCATGTCTGAAGTAGTAGTCTTACTCAGTTGCAATGACTTACATGAGCAAATAAGACCTTCAAGGCCTATATTTTTCAGTCAAATTTAAGGCCTCATAGATATTTATATTTCAACTGGTTCTCTACATCTAATACTACCGCATTGCCTCCAATTTTATAGTACTTGGCTGATGATTAATTAATACTTACATGCTGCAAATGATTCTTATCTAGC 1917 0.3938 MVQFKLVTITLLMLWSSWWSFEGAVGDPQLFLLKWECSVVSVHDLSNFYQNINASLEVLRENISNERKHFATAQSTSGTDPVYAMFQCRNYLSKDDCAACLAAAATRIRGCSTGNGAHVIYDGCILRYENNEFLKQNIISSSHTICGNETADESTDFGAVGQQVLKDLKIATPQISGYFASTKTQVAGGAIYAIAQCAEALTQQTCLDCLSIEQSGIQECLPNTDGRGVNPPVCFMRYSETPFFADNQITDISHFLKQGGGDSLKKMVVIGGGVAGALLIIIFLISIIFPRHRGFQNPKRISRREGGFGTVYKGTMPNGKVVAVKRLITGDSSKINDEFEREVKFISNVNHINLARLLGYCSKGEEKILVYEYMANSSLDKFLFGKRKGSLNWKQRYDIILGTAKGLTYLHEEFHISIIHRDIKSGNILLDEQLQPKISDFGLVKLLPGDQTHLHTRVAGTLGYTAPEYVLHGHLSEKADTYSYGIVVLEIVSGRKSTDVKVIDDNGDEEYLLRQAWNLYEKGMLLELVDKSLDPNNYDAEEVKKVISIALLCTQASAAMRPTMSEVVVLLSCNDLHEQIRPSRPIFFSQI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00650 591 SMART serkin_6 295 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00650 591 SUPERFAMILY Protein kinase-like (PK-like) 305 571 IPR011009 -
Pste4g00650 591 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Pste4g00650 591 CDD STKc_IRAK 305 568 - -
Pste4g00650 591 ProSiteProfiles Protein kinase domain profile. 297 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00650 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Pste4g00650 591 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Pste4g00650 591 Pfam Salt stress response/antifungal 43 130 IPR002902 -
Pste4g00650 591 Pfam Salt stress response/antifungal 150 240 IPR002902 -
Pste4g00650 591 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 589 - -
Pste4g00650 591 FunFam Cysteine-rich receptor-like protein kinase 2 374 579 - -
Pste4g00650 591 Gene3D - 31 133 IPR038408 -
Pste4g00650 591 Gene3D - 139 243 IPR038408 -
Pste4g00650 591 Coils Coil 49 69 - -
Pste4g00650 591 Pfam Protein kinase domain 305 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00650 591 FunFam Cysteine-rich receptor-like protein kinase 2 141 243 - -
Pste4g00650 591 FunFam Cysteine-rich receptor-like protein kinase 2 29 133 - -
Pste4g00650 591 Gene3D Transferase(Phosphotransferase) domain 1 375 582 - -
Pste4g00650 591 Gene3D Phosphorylase Kinase; domain 1 304 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00650 Pste-Chr4 4978048 4983576 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00650 71 572 Receptor kinase-like Gene Family AT4G05200 33.393 3.55e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g00650 Pkinase 1.7e-44 CL0016