Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00639 ATGTCCACTGCCATGGAAAACAATAGCCACCACCAAAACAACAATGATATCATAACATCCACCGATTTCTCTCCGACAAAGGAGAGAAGGGGTTTGGATTTGGATTTGGATTTGAATGCACCCATCATCAATACAAACAACGAGGCTTCTCCTCCCCGAATCGATATCAATTCACTTCCAATTTCTGAGGTTTCTGATGATAATAATTGCTTGGTGGCAATGGAAGGGTGCCAAGTTCTTGCTCCGGCGACGTTGGATCTTATTGATACACATGAACAAGGGAAGTCCTCCAATGATGCTGAAACGGTGAAGTTTCCATTTGATCTTAATGCTAAACTTGATGAGGCGGAGGAACCATTTACTAATGAGACTAAGCCCGCCAAGTCTGCTGTTGCTGACAACATTCAAGCTTTACCTTCAGCTGAATTGGAGGTCACTCCAGATGTTGCTGCTGACAATGACAATGAAGACAGAGGCAGTGCTGTTGAGGGAGGATCTAGCTCTCACAACAGGAAGAGATCCTGGGAGAAATATAAGAAAGGGACAATGAAGGGTTTCCGTGGGAAAACAAAGGTGGAAATTGAGAGGCGAAAAGTGACCATAGTGGATGACGGTTATCGCTGGCATAAATATGGAGAGAAGACTATCAAGGGGCATATATTCCCAAGTGAGTCTTTGCCTGGCTTTGTAGCCACTCACTTCTCTTTAGGAATAGGTCGGGCATCGGGGCATGCCTTCCTATCGTTTGGTGGATGTTTGTTAATTTCAGACAGGGCATACTACAAATGCATGAGTGATGGGTGCACCGTTAGGAAGCACGTGGAGCGGGATTCCTTCAAGAGGAATAATGTGATTACTACTTATGAGGGAGAACATAATCACGAACAACCATCCACTAGGAACCTTAACTATAAGAAACTACGTCTATATGGATATGAAGAAGATCATGAATTTGAAGATGATTGTAGTGAACAACTTGCTGCTACTGTAGCCAATGCGCTGCTGACTTTTGGGTTACCTGGGACTGGAAATTTTCTGAATACCTCAAACCTTTTTGGAAGTCTCAACAATAACATGAATGATGGATCTTTGTCCTACACTCCTCAATCCCTTGCACATTATTCTTTCATGAATAATCTTAATACCATGCCTTACCGCTTCTATGGACGTAACCCTGCTCCTCAATCTGGGGCTTCGATGTCTCCTTTTACTCAATATAGGGTTAATGTTAACGGGTTAAGTTCAGAGTTCCCTTGCGGAGCAACTGGTGTAAGAGATTATCACTGCAGGGGATGCATCCAACTCCTTCTAATTATATCAGATTTGGCTCTTTTGTTGTATGCCAGTAAAGTTGGTGATTGTGGTATCACTGGTAGGAGGTTGTTGTTTCATTCCCACTATGCAGGGGGACATCATGAGAGCTGGCTTTTGATTGTGGTATTTTGGCTTGCTGGTTTTAACTGA 1464 0.4324 MSTAMENNSHHQNNNDIITSTDFSPTKERRGLDLDLDLNAPIINTNNEASPPRIDINSLPISEVSDDNNCLVAMEGCQVLAPATLDLIDTHEQGKSSNDAETVKFPFDLNAKLDEAEEPFTNETKPAKSAVADNIQALPSAELEVTPDVAADNDNEDRGSAVEGGSSSHNRKRSWEKYKKGTMKGFRGKTKVEIERRKVTIVDDGYRWHKYGEKTIKGHIFPSESLPGFVATHFSLGIGRASGHAFLSFGGCLLISDRAYYKCMSDGCTVRKHVERDSFKRNNVITTYEGEHNHEQPSTRNLNYKKLRLYGYEEDHEFEDDCSEQLAATVANALLTFGLPGTGNFLNTSNLFGSLNNNMNDGSLSYTPQSLAHYSFMNNLNTMPYRFYGRNPAPQSGASMSPFTQYRVNVNGLSSEFPCGATGVRDYHCRGCIQLLLIISDLALLLYASKVGDCGITGRRLLFHSHYAGGHHESWLLIVVFWLAGFN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00639 487 ProSiteProfiles WRKY domain profile. 197 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g00639 487 MobiDBLite consensus disorder prediction 1 26 - -
Pste4g00639 487 MobiDBLite consensus disorder prediction 141 174 - -
Pste4g00639 487 Pfam WRKY DNA -binding domain 203 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g00639 487 Pfam WRKY DNA -binding domain 257 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g00639 487 SMART WRKY_cls 202 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g00639 487 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 129 313 IPR044810 GO:0003700
Pste4g00639 487 Gene3D WRKY domain 186 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste4g00639 487 SUPERFAMILY WRKY DNA-binding domain 257 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste4g00639 487 SUPERFAMILY WRKY DNA-binding domain 198 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste4g00639 487 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00639 Pste-Chr4 4866946 4877519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00639 168 300 WRKY Transcription Factor Family AT5G56270 36.029 1.14e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste4g00639 WRKY 5.9e-10 CL0274