Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00612 CAAACATGGGTAGTCTTCAAATCAGAAAACCACTCCTTTTCACTCTCCTCACTGTATCACTTGTTTTAATTACTAAACTCTTGCATTCTTATTTCTCCATACCTTTCTCTCCGTTCAATCTTTGTATTGCCGTTGCCCCCATCATCGTATACTTGTTTTCATCAACCTCTAACACTCTTCCCCCCGGTCCTTTATCTGTTCCTATATTTGGTAACTGGTTACAAGTTGGCAACGACCTGAACCACCGTCTTCTGGCATCAATGTCACACACCTATGGTCCCGTTTTCCTTCTCAAACTTGGTTCCAAAAACTTGGTCGTTGTCTCTGATCCCCAGCTGGCCGCCCAAGTTCTCCACTCACAAGGTGTGGAGTTTGGTTCTCGTCCACGAAACGTTGTGTTTGATATCTTCACTGGGAATGGCCAAGACATGGTTTTCACTGTGTACGGTGATCACTGGCGCAAAATGCGCCGAATAATGACTCTCCCCTTCTTCACCAACAAGGTTGTCCACAACTACAGCAACATGTGGGAGGAGGAGATGAACTTGGTGGTGCGTGACCTCAACGTGCATGAGAAAGCCACGAGCCAAGGGATAGTTATCAGAAGACGTCTTCAGTTGATGCTGTACAATATCATGTACAGGATGATGTTTGATGCCAAGTTTGAGTCTCTCGAGGATCCTTTGTTCATTCAGGCCACCAGGTTTAACTCCGAGAGAAGCCGTTTGGCTCAGAGTTTTGAGTACAATTATGGGGATTTTATACCATTTCTCAGGCCATTCTTGAGGAGATACCTCAACAAGTGCAAGGACTTACAATCTAGGCGGTTGGCATTTTTCAACACCCACTACGTGCACAAAAGAAGACAAATAATGGCTGCCAATGGGGAGAAGCATAAGATCAGCTGTGCAATTGATCACATCATAGATGCTGAGATGAAGGGAGAAATCAGCGAAGAAAATGTGATATATATAGTAGAAAACATCAACGTTGCAGCAATAGAGACAACATTATGGTCTATGGAGTGGGCAATAGCAGAGTTGGTGAATCATCCAAGTGTCCAAAGCAAGATTCGTGATGAAATATCAAGAGTGCTTAAAGGGGAGCCGGTAAGAGAATCCAACCTACACGAGCTACCATATTTACAAGCCACGGTGAAAGAGACACTGAGACTTCACACCCCAATTCCTCTATTGGTGCCCCACATGAACCTGGAAGAAGCAAAGCTAGTAGGGTACACAATTCCAAAAGAATCCAAGGTGGTAGTGAATGCATGGTGGCTTGCCAACAACCCATCATGGTGGAAGAACCCAGAGGAGTTCAGGCCAGAAAGGTTCTTGGAAGAGGAATGTGCTACAGATGCAGTTGCAGGAGGAAAGGTTGACTATAGGTTCGTGCCATTTGGTGTAGGAAGGAGGAGTTGCCCTGGGATCATACTTGCATTGCCAATACTGGGACTTGTGATTGCAAAGTTGGTGACAAGTTTTGAGATGAGTGCTCCAGAAGGAACAAAGATAGATGTGAGTGAAAAAGGAGGCCAATTCAGCTTGCACATTGCAAATCACTCCACTGTGTTGTTCCATCCAATTAAGACACAATGATTTCCGTCATTACAAAGCAAGCACTCTGCACTTAGCTTATCAACACCTCTTAAGTCTCTCGGTGCTGCTTCCCTAGTTGCATTTCCATTTTTTTCAGATAAAGATGCATTTGTTTCTCTTTCTATTTCACAATTATATGTATAAAGTATACTACGTGTGATGTTTCTCCGTAAGGCAATTTGAGTTCTCTAGTTATCAATACCCAACAATATAAAACAAAGTTTTTTG 1829 0.4352 MGSLQIRKPLLFTLLTVSLVLITKLLHSYFSIPFSPFNLCIAVAPIIVYLFSSTSNTLPPGPLSVPIFGNWLQVGNDLNHRLLASMSHTYGPVFLLKLGSKNLVVVSDPQLAAQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSNMWEEEMNLVVRDLNVHEKATSQGIVIRRRLQLMLYNIMYRMMFDAKFESLEDPLFIQATRFNSERSRLAQSFEYNYGDFIPFLRPFLRRYLNKCKDLQSRRLAFFNTHYVHKRRQIMAANGEKHKISCAIDHIIDAEMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPSVQSKIRDEISRVLKGEPVRESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLVGYTIPKESKVVVNAWWLANNPSWWKNPEEFRPERFLEEECATDAVAGGKVDYRFVPFGVGRRSCPGIILALPILGLVIAKLVTSFEMSAPEGTKIDVSEKGGQFSLHIANHSTVLFHPIKTQ 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00612 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Pste4g00612 531 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 SUPERFAMILY Cytochrome P450 59 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 42 529 - -
Pste4g00612 531 FunFam Trans-cinnamate 4-monooxygenase 48 522 - -
Pste4g00612 531 Pfam Cytochrome P450 59 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 Gene3D Cytochrome P450 51 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00612 531 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00612 Pste-Chr4 4665546 4667620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00612 68 527 Monolignol Biosynthesis Gene Families AT2G30490 64.579 0.0 629