Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00583 TACCGCATCACCACCACACCACACCATCGCCCAATTACCGCACCACCGCCGCACTGTTGTTGCACCACTTTTGTCAATCGCCATTGTCTTTGTCTCACTCTCACAAGGAGAAAAACGTGCACCAGCCACACCGCCCAATTGTCGTACCACCGCTACCCAGCCACGTTAATCACTATGCCTCTCTCATCTCCCACAGTGTTGCTCTCTCTCTTGGAGCTCAACGACACCTCCTCTCATAGACTTAACCGTGGAGTTCTCTTATCGCTTAACAAAACCCTTAAACACCGCTTTCATCTTGCAAGGTTGCACTCTGTTACTCTCATCTCTCTCCAACCAATCACTCTTATACCCTTTCTGATTGATATTATGGAAGAGATACAAGACTCTCACCTTCATGTCACTTCTAAAACCAATTCAATAAGTCCTACCTCATCAACACATGAAGCAAATGAATTAATGGTAATTGCAAATATTGAGGACAAATTGGAGCCTCGAGTTGGTAAATTATTTGAGAATTTAGAAGAAGATGAAGAATTTTACAAAAATTATGCACATAGTGTTGGCTTTAGTGTGCGTCGATCATCAGAGGAAAAAGATAAAGAAGGCAATATAATTTGGAAGTATTTTGTTTGCTCAAAGGAAGGTTACAAACCATATAAGGAACTGGTGGAGGAAAGTCAACTAACTACTAGGATTAGAAGAACGAGCCTTACTAGAGAAGGGTGCACTGCAAGGCTATTTTCAAATTGGTGGACGAAGGTAAATATGTACTCAATCGATTCATTGAAGACCCTTCACATATCAGCAAGAAAAGTGAATCCTGTGGATAAGAGTTTAATGCGTACATATAATAAAGCAAATATTGGGGCTTCAAAATCGTTTCAGTTAATCAAAGAACAAGTTGGGATTTATGAAAATGTAAGGTGTACGCAGAAAGATTTCCAAAATTATTCAAGAGATTTAAAAACTTTGATTAAAGATTCTGATGCTCAAGTTTTTATTGACAACTTTAAGAGGAAACAAGAAGAAAATCCATCATTCTATTATGATCATGAGCTAGAAGGAGAAGGTGGATTGAAATATGTTTTTGAGCAGATGAATTATTCATTGTTTCAAGATGTGGTCTCTTTTGATACTACATATGGGACAAATAAATATTCAATGATTTTTGCCTCATTTACTGGAGTAAACCATCACAGACAGTGTGTTAATTTTGGAGCAGGTTTTTTAGCAGATGAAAAAATTGATTCATTCATATGGTTGTTTGAAAAGTTTTTAGAAGCAATGGGAGGACATGAGCCAATTCTTATAATAACCGATCAAGACCCTGCTATGAAAGTTGCTATAGAAAAAATATTTAATTCTTCTACTCATAGATTTTATATGTGGCACATTATGAAAAAAATTTCTGAAAAGGTCGGTGTTTCTTTGAATGCTAATGAAGAGTTCAATAATAATTTCAAGTCTTTTGTTTGGAAATCAGAAACACCAGATGATTTTGAGACAACATGGAGCTCTATAATTACCAAGCATAAGTTAGAAAAGAATGATTGGCTCTCACATATGTATGACATTCGAAACATGTGGATTCCAGCTTACTTTAAAGACATTTTTTTGGTTGGGATATTGAAAACAACATCAAGATCTGAAAGTGAGCATTTCTTTTTTGGTAATTTTTTGAATCCTAATGTTGGGTTGGTTGAGTTTTGGATGAGGTTTGATTCTGCAATTGAAACACAAAGGCAAAAGGAGTTATTGGCTAATAATATTTCCCTTCATTCCATGTCAAAACTAAAGTTAGAGCGCAATCTAGAGAAACATGGGAAATATGTTTATACTCGTGAGAACTTTTACATATTTCAGCAAGAATTGTGGATAGCCTATTTAGATTGTGATGTTGAAAGTAAGAAAGAGGAACAAGAAATAGAAACATTGCTTGTGACTGATAGTAGTGTAGCCAATGTTTGTTCATGTACAATGTTTCAATCTAAAGGCATGCCTTGTAGACACATACTTTGTGTTTTAAAAGGTAAAGGTTTGAATGAGATACCCAATAATTATATTGTGCATAGGTGGACCAAAGTTGTGAATATTGAAAAGCAATTGACTCAATATGAAAAAGATCCTAAACAAACTAAGGAAGATGATTTGCAAGCTTTTATTGGATCCAATGTTTCTGAAGAAGTTGAAATTCTCCCACCACAATTTTCAAAGACAAAAGGAAGTGGTAAACGGATCAAAGGTGGCAAGGAGAAAGCAATTGAACAACAGCAAAAAAGAACTAGACTTTGTAAAGCACGTGGTCAATATGAATTTCATGACAGCCGCAATTGTCCCCAAAAGCCTTCTCCC 2352 0.3597 YRITTTPHHRPITAPPPHCCCTTFVNRHCLCLTLTRRKTCTSHTAQLSYHRYPATLITMPLSSPTVLLSLLELNDTSSHRLNRGVLLSLNKTLKHRFHLARLHSVTLISLQPITLIPFLIDIMEEIQDSHLHVTSKTNSISPTSSTHEANELMVIANIEDKLEPRVGKLFENLEEDEEFYKNYAHSVGFSVRRSSEEKDKEGNIIWKYFVCSKEGYKPYKELVEESQLTTRIRRTSLTREGCTARLFSNWWTKVNMYSIDSLKTLHISARKVNPVDKSLMRTYNKANIGASKSFQLIKEQVGIYENVRCTQKDFQNYSRDLKTLIKDSDAQVFIDNFKRKQEENPSFYYDHELEGEGGLKYVFEQMNYSLFQDVVSFDTTYGTNKYSMIFASFTGVNHHRQCVNFGAGFLADEKIDSFIWLFEKFLEAMGGHEPILIITDQDPAMKVAIEKIFNSSTHRFYMWHIMKKISEKVGVSLNANEEFNNNFKSFVWKSETPDDFETTWSSIITKHKLEKNDWLSHMYDIRNMWIPAYFKDIFLVGILKTTSRSESEHFFFGNFLNPNVGLVEFWMRFDSAIETQRQKELLANNISLHSMSKLKLERNLEKHGKYVYTRENFYIFQQELWIAYLDCDVESKKEEQEIETLLVTDSSVANVCSCTMFQSKGMPCRHILCVLKGKGLNEIPNNYIVHRWTKVVNIEKQLTQYEKDPKQTKEDDLQAFIGSNVSEEVEILPPQFSKTKGSGKRIKGGKEKAIEQQQKRTRLCKARGQYEFHDSRNCPQKPSP 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00583 784 ProSiteProfiles Zinc finger SWIM-type profile. 642 679 IPR007527 GO:0008270
Pste4g00583 784 SMART 26again6 654 681 IPR006564 GO:0008270
Pste4g00583 784 Pfam MULE transposase domain 374 468 IPR018289 -
Pste4g00583 784 MobiDBLite consensus disorder prediction 736 760 - -
Pste4g00583 784 Pfam FAR1 DNA-binding domain 178 266 IPR004330 -
Pste4g00583 784 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 157 711 IPR031052 GO:0006355
Pste4g00583 784 MobiDBLite consensus disorder prediction 744 760 - -
Pste4g00583 784 Pfam SWIM zinc finger 653 674 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00583 Pste-Chr4 4451939 4454761 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pste4g00583 MULE 6.4e-25 CL0219