Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00574 ATATTAATGAATGCAAGGAATCCAATGATTGTATCGAGTAGAAAAAATGCATTAACTTTCCTCCCGGAGCTACCGTTGTTCTTGCCCATATGGATACAAAGGAGATGGTGTGGGTGTAGGTCGACTGAAATAACTAAAATGTTTACTCTAGAGGAACTAGAGGAGGATAGTAAGGTGGGCAAGGAACAATTTACAAAGGAATATTACCTAATGATAAAAAGATCCATTTCTCAAATCAACCCTAAAAATGTGGTAAAACCATTGGGATGCTGTTTAGAATCAGAAGTTCCCTTACTTGTTTATGAATTTATTCCCAATGGTACTGTTTATGAACATCTTCATGATCATGGTCAATTTTTAAGACTTACATGGAAAATAAGATTGCAAATAGCAACAGAAACTGCTGGAGTCTTGGCATGCTTAGATTCAGCTACCTCTGTACCAATTATACATAAATACTAA 462 0.355 ILMNARNPMIVSSRKNALTFLPELPLFLPIWIQRRWCGCRSTEITKMFTLEELEEDSKVGKEQFTKEYYLMIKRSISQINPKNVVKPLGCCLESEVPLLVYEFIPNGTVYEHLHDHGQFLRLTWKIRLQIATETAGVLACLDSATSVPIIHKY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00574 153 Gene3D Transferase(Phosphotransferase) domain 1 42 153 - -
Pste4g00574 153 Pfam Protein tyrosine and serine/threonine kinase 59 145 IPR001245 GO:0004672|GO:0006468
Pste4g00574 153 SUPERFAMILY Protein kinase-like (PK-like) 57 151 IPR011009 -
Pste4g00574 153 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 76 152 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00574 Pste-Chr4 4375699 4376590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00574 53 152 Receptor kinase-like Gene Family AT1G21250 56.000 6.26e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste4g00574 PK_Tyr_Ser-Thr 1.4e-07 CL0016