Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00572 TGGTTCAACTAAAACAACTAAAATCTTTATTCTGGAGGAACTAAAGGAGGCTAGTAAAAATTTTTATGAAAGCATGGTCTTTGGCCAAGGTGATCATGCTTTCTCAAACCAACATATGAATGTGGTAAAACTCTTGGGATGTTGTTTAGAAGCAGAAGTTTCCTTGTTTGTTAATGAATTTATTCTCAATGGTACTATTTATAAGCATCTTCATGATCAAGACTTACATGGAAAACAAGAAATGCAAATAACAACAGAAACTGCCAGGGTCCTTGCATTTTTACATTCAATTACCTCCACACCAATTATACACAGAGATGTGAAACTGCAAATATACTACTTGATTACAATTTCACTACTAAGATATCTTGACCTAGAATACTTGGAAATAAGTCAATTAAATGAGAAGAGTAACGCGTTCAGCTTTGGAGTTGTCTTAATGAAATTGCTAGCAGTAAAGAAGGCACTTTCTTTTGATAGGCTAGAGCCTCATAGAAACTTTGCAGTGTACTTTCATTCTTTAATTAATGAGGGTAGATTTCTTAGAATTATAGATATCCATATAATAGATGAGGCAAATGTTGGGCAT 589 0.3345 MVFGQGDHAFSNQHMNVVKLLGCCLEAEVSLFVNEFILNGTIYKHLHDQDLHGKQEMQITTETARVLAFLHSITSTPIIHRDVKLQIYYLITISLLRYLDLEYLEISQLNEKSNAFSFGVVLMKLLAVKKALSFDRLEPHRNFAVYFHSLINEGRFLRIIDIHIIDEANVGH 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00572 172 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 85 IPR045274 GO:0007166
Pste4g00572 172 Gene3D Transferase(Phosphotransferase) domain 1 91 170 - -
Pste4g00572 172 Pfam Protein tyrosine and serine/threonine kinase 13 84 IPR001245 GO:0004672|GO:0006468
Pste4g00572 172 Gene3D Transferase(Phosphotransferase) domain 1 8 86 - -
Pste4g00572 172 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00572 172 SUPERFAMILY Protein kinase-like (PK-like) 13 161 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00572 Pste-Chr4 4362818 4363602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00572 14 169 Receptor kinase-like Gene Family AT1G21230 42.473 5.06e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste4g00572 PK_Tyr_Ser-Thr 2.3e-09 CL0016