Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00564 ATGGGAAAGAGAGCACTGAAGCTTCCCTCTCTTTTCAAAGCCAAGGAGGCAGCAAGAAAGCATGAGCATCATCACAATCCATGGCAATTCATGCCTTCTTGTGGCCAATCAAAAACCCTCTCTTTCCGAGTTGGAGATGATGAAATGTTCAAGACAGTTAACTCTGTGTTCTTCGACCCTTCAGCCGAGAGCACTATTGAAACTCCCAAGTCATGGTTCACAACCTCATCTGAATCTGCCAGCATCTCAACCGAGTCAGAAGACTACCACTGCTGTGATGGGGAGTCTTTGGAGATGTTGGTACGTGGGGTGAGGTCAGAGAGGCTGTTTTTTGAACCAGGCGACACAAGCTCCATCTTGGAAAAGGCCAAGGCTAGTGGTTTTCCCTTCAAAGAAAGTGTGGTCCTTGCCATGGAGTCAGAAGACCCTTATGAGGACTTCAAGAGATCAATGGAGGAGATGGTTGAGTCTCATGGAGTAAGGGATTGGGAGGGCTTGGAGGAGCTTTTAACTTGGTATTTAAGGGTCAATGGTAGAAACAATCATGGGTTTATAGTGGGAGCTTTTGTTGATTTACTCTTTAGCTTAGCAGCTTCTAATAATTCTAACTCCTCTTCTGATTCAACTTCGTATTCTTCTGCTGTTTCTTCTTTTGCTTCTTCCCCCTTGAGTGGCCAGAATGAGATTGTTGAGCATGGGATTGGGAATGATGATGCTGTAACATCTTAG 729 0.4513 MGKRALKLPSLFKAKEAARKHEHHHNPWQFMPSCGQSKTLSFRVGDDEMFKTVNSVFFDPSAESTIETPKSWFTTSSESASISTESEDYHCCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLRVNGRNNHGFIVGAFVDLLFSLAASNNSNSSSDSTSYSSAVSSFASSPLSGQNEIVEHGIGNDDAVTS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00564 242 Pfam Transcriptional repressor, ovate 140 196 IPR006458 -
Pste4g00564 242 ProSiteProfiles OVATE domain profile. 136 195 IPR006458 -
Pste4g00564 242 NCBIfam uncharacterized plant-specific domain TIGR01568 134 197 IPR006458 -
Pste4g00564 242 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 23 197 IPR038933 GO:0045892
Pste4g00564 242 MobiDBLite consensus disorder prediction 217 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00564 Pste-Chr4 4318529 4319257 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pste4g00564 Ovate 4.7e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02565 4 18084961 18093605 Pste4g00564 4 4318529 4319257 ECH
Pste4g00564 4 4318529 4319257 Pste4g00564 4 4318529 4319257 ECH