Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00513 TGTTGGGAGATGAGGTTGAAAAGTTTGAACCTTGTGTGTGTGCTATGCATGAAGCATTGAAGCTAGATGGACTTCAGTTTGAGAATAATTGTCAAGTTGAAGTCTTCTCAAAACTTACCAATGCCTATTGTTTAGTTGCCATTGGAGGTTCTGAAAACTTTTACAGTGCATTTGAGACTAAGTTAGCAGATGTTATCCCTGTGGTCAAGACCTCCATTGGTGGCACTCGTATTATTGGTTGTCTTTGTGTTGGAAACAAGAATGGGCTTCTCTTGCCCCATACCACCACGGACCAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTCGTTCAGCGTATAGAAGAAAGATTATCTGCTCTGAGAAATTGTATAGCATGTAATGACCATGTGGCCCTTACACAAACTGATCTTGACATGGAAACTGAGGAGGTGATTGCAGATGTTCTTGGTGTAGAAGTTTTTAGGCAGACTATTGCCGGTAATATTCTTGTTGGAAGTTACTGTGAATTCTCCAACAGAGGGGGTTTGGTCCACCCTCATACTTCCGTTGAAGATTTGGATGAACTTTCTTCACTCCTTCAGGTTCCTTTGGTTGCCGTGACCGTCAATCGTGGTAGTGAAGTAATAGCTGCTGGCATGACAGTGAATGATTGGACAGCATTTTGTGGTTCAGATGAGAAAATCACTCAT 701 0.4194 MHEALKLDGLQFENNCQVEVFSKLTNAYCLVAIGGSENFYSAFETKLADVIPVVKTSIGGTRIIGCLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALRNCIACNDHVALTQTDLDMETEEVIADVLGVEVFRQTIAGNILVGSYCEFSNRGGLVHPHTSVEDLDELSSLLQVPLVAVTVNRGSEVIAAGMTVNDWTAFCGSDEKITH 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00513 219 FunFam Eukaryotic translation initiation factor 6 7 219 - -
Pste4g00513 219 Hamap Translation initiation factor 6 [eif6]. 1 219 IPR002769 GO:0042256|GO:0043022
Pste4g00513 219 SMART eIF6neu2 8 209 IPR002769 GO:0042256|GO:0043022
Pste4g00513 219 NCBIfam translation initiation factor IF-6 11 214 IPR002769 GO:0042256|GO:0043022
Pste4g00513 219 PIRSF Transl_init_IF-6 6 218 IPR002769 GO:0042256|GO:0043022
Pste4g00513 219 CDD IF6 10 214 IPR002769 GO:0042256|GO:0043022
Pste4g00513 219 Gene3D - 9 218 - -
Pste4g00513 219 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 10 215 IPR002769 GO:0042256|GO:0043022
Pste4g00513 219 Pfam eIF-6 family 10 208 IPR002769 GO:0042256|GO:0043022
Pste4g00513 219 SUPERFAMILY Pentein 10 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00513 Pste-Chr4 3868131 3871825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00513 10 219 Eukaryotic Initiation Factors Gene Family AT3G55620 87.143 7.83e-137 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01310 9 11626254 11629854 Pste4g00513 4 3868131 3871825 PCT