Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00493 GGCACTGCGGCATTGGTGGTGGGAACTTGTGCAACTCTGAAACCCTTTACGCGGCTCCAGCCATGGCTTCCAGGTACGGTTATTATCTCCCTTCTCCGCTCATTTTCATTGAAAACCGAACAAGGGTAGGCCAAAAATGGAACCTTTCCCACCCTTACCCATTAAGCATACCATGTGTTTGTTTCCGTGTCTGAACAAGTCGGTCTATTTTTGTCTGCACAGGCGTTTGAGGGCATTGAAGCATTGGATGAAGTCCAAGGGGTTCCAATGGAGTGACGATGCTCTAGGGTTTGTGGAGACCCCAGAAGAGGGAATAGCAGTGAGAGCTTTGCGCGAGTTGAAGGAGGGTGAAGTGGTGGCCAAGATGCCAAAGGAAGCCTGCCTCACCACCAAGACTAGTGGGGCACGCGAGATCATTGAAGAGGCTGGTTTGGATGGTCATTTGGGGCTTGCATTTGCCATCATGTATGAGAGAAGCTTGGCTGGGGACTCCCCTTGGGCTGGCTACCTTCAACTCTTGCCTGACCAAGAGTGCGTGCCAATTGTTTGGACCCTCCATGAAGTAAACCACCTTTTGTGTGGTACTGAACTTCACCAGACTGTGCAAGAAGACAAGACTCTTATCTATGAGGACTGGAAAGAGAATATTCTCCCCCTATTGGATTTAGCTCCTTCAAAACTGAACCCAAAATTCTTTGGCATAGAACAATACTTTGCAGCAAAAAGTCTTATATCCTCTCGATCTTTTGAGATTGATGATTACCATGGTTTTGGCATGGTTCCCTTGGCAGATCTATTCAATCATAAAACAGGTGCAGAGGATGTGCATTTCACTGCTATGCCCTCTAATGATGAATCTGATACTGATGTTGATGATTGTAACAATGAAGAGGGCATTGTTGAGGAAGAAGCATTGGCTCAAAATTCCTCGATATATATGTCTGAGTTAAATACTGCTAATATTGGGAACCGCATTGTTATTGACTCTGAGAGTTCATCAGTTAGTGAGGATGACACTTCCATGCTGGAGATGATTATGATAAAAGATGTCAGCAGTGGAACTGAGGTATTTAATACTTATGGTCTACTGGGTAACGCTGCTTTGCTTCATAGATACGGATTTACTGAGCAAGATAATTCCTATGATATTATAAACATAGATATGAAACTAGTACTTCAATGGTGTTCTTCCATGTTTTCTGACCGCCACAGTAGAGCAAGAGTTTCCTTTTGGAGAAGGCTAGACTATTCTGCATGTGGGAGCCAAAACTCTGAATATTTTGAGATCTCATTCGATGGAGAACCACAGATTGAACTTCTCATTTTATTGCACATCATGTTATTACCTGATGATGCCTACCATAAGTTAGACTTATCGGTGTCAATTGCTGGAAATTGTGTTGAATCGAGTGGAACCACCCTTCTAAATGATAATATCTTTCCTAATAAAGCATTTAATACGAGCAAGAAGTCCATGCTGCCTAAAAATGTTTGTGATGCCCTGTTGTCTCTTGCTGATATGAGGGAGAGTCTCTATGGTTTGAAATCAATTGAAGAAGATATTGAGGCATTGGGAAGGTGTAGTTTAGTTAGAGAGAAAAAGCTGTATAATTCTTTGGTGCTGCGCATCAATGAAAGGAAGATCCTTAGGAAGCTAAGGAATTATGCTTCACAGTCATTTAAAACCCCTAATCATAGTTCTCCGAGGAAGAAATTGAAAAGGACAACAAAGAGAACAAGTTGATTTTTTTTTTACCCATGAGATGCTTTAACTTGTTATATTTGATTTTTGGTCAATAAAAGATAATGTATGGTTTTCTTTATATTAATTCCTTAATGTACCATTTGCGTTTCCGT 1857 0.4152 MEPFPPLPIKHTMCLFPCLNKSVYFCLHRRLRALKHWMKSKGFQWSDDALGFVETPEEGIAVRALRELKEGEVVAKMPKEACLTTKTSGAREIIEEAGLDGHLGLAFAIMYERSLAGDSPWAGYLQLLPDQECVPIVWTLHEVNHLLCGTELHQTVQEDKTLIYEDWKENILPLLDLAPSKLNPKFFGIEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTAMPSNDESDTDVDDCNNEEGIVEEEALAQNSSIYMSELNTANIGNRIVIDSESSSVSEDDTSMLEMIMIKDVSSGTEVFNTYGLLGNAALLHRYGFTEQDNSYDIINIDMKLVLQWCSSMFSDRHSRARVSFWRRLDYSACGSQNSEYFEISFDGEPQIELLILLHIMLLPDDAYHKLDLSVSIAGNCVESSGTTLLNDNIFPNKAFNTSKKSMLPKNVCDALLSLADMRESLYGLKSIEEDIEALGRCSLVREKKLYNSLVLRINERKILRKLRNYASQSFKTPNHSSPRKKLKRTTKRTS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00493 535 CDD SET_LSMT 49 330 - -
Pste4g00493 535 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 30 480 - -
Pste4g00493 535 Pfam SET domain 59 316 IPR001214 GO:0005515
Pste4g00493 535 SUPERFAMILY SET domain 29 231 IPR046341 -
Pste4g00493 535 Gene3D set domain protein methyltransferase, domain 1 27 329 - -
Pste4g00493 535 PIRSF RMS1_SET 20 515 IPR011383 GO:0016279|GO:0018026
Pste4g00493 535 MobiDBLite consensus disorder prediction 514 535 - -
Pste4g00493 535 SUPERFAMILY SET domain 292 335 IPR046341 -
Pste4g00493 535 MobiDBLite consensus disorder prediction 521 535 - -
Pste4g00493 535 ProSiteProfiles SET domain profile. 48 316 IPR001214 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00493 29 527 NAC Transcription Factor Family AT3G56570 52.952 1.80e-177 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste4g00493 SET 1.6e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00493 4 3734877 3738178 Pste4g00493 4 3734877 3738178 ECH