Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00490 TACTTACACAGCATATATATAAGTGTATGTGCTTTGTCAAGATGTTGTATAAATCATCTATGAGGCCTTTAAAGATGGTCATGGCTAAGTTGCTTACAGTGTTGTTACTAATTGAGGTGTTTGCACATGGCTTCAGATATGGAGCAGATGGCTTAACGATGAACTACTACTTGATGAGTTGTCCTTTTGTTGAACCTGTTGTTAAGAACATTGTCAACAGAGCTTTGCAGGATGATCCCACCCTAGCAGCTGGTCTTATTAGAATGCACTTTCATGACTGCTTCATTGAGGGATGTGATGGCTCTGTTCTGATTGACTCCACTAAGGATAATACAGCAGAAAAGGATTCTCCAGGAAATTTGAGCCTGAGAGGCTTCGAAGTCATAGATGATATCAAAGAAGAGCTTGAAAGACAATGCCCTGGCGTGGTCTCATGTGCTGATATTCTTGCCATGGCTGCTAGAGATGCAGTTTTCTTTGCTGGAGGCCCAGTGTATGACATCCCTAAAGGAAGAAAGGATGGAAGAAGGTCCAAAATTGAGGATACTATCAATTTGCCATTCCCTACTTTCAATGCCTCTGAGCTCATTAGGTCCTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGGGGCTCATACACTAGGAGTGGCAAGATGTGCTTCTTTCAAGAACCGATTGGACCAAGTGGATCCAACTTTGGATGCACAATTTGCTAAGACACTTTCGAGAACATGCAGTTCAGGCGACAACGCACAACAGCCATTCGATGCCACAAGTAACGATTTTGACAACGTTTACTTCAACGCTTTGTTGAGGAAAAATGGGGTTCTCACATCAGACCAAACACTCTACACTAGCCCCAAAACCAGGAACTTTGTGACTGCTTATGCGTTCAACCAAGCCATGTTCTTCTTTGATTTCCAACAAGCAATGGTGAAGATGGGCCTGCTTGAGGTCAAAGACAATTCCAACGGTGACGTACGAGATAATTGCCGCAAAATAAACTGAATTATTCTGGGTTTGTGATGGTTTTAGCTTTAAGTCAGATCTCAAACCTTGCCATTAGTTAAAGGTACATTCTATGCATATTATATATATGTATGTATAAATATTGTGTATGCTTAACTAGTTTTATTTTGCATCTGTTGGATCTATTTTGTAGTTATGGTTGTAATCCTTAATCATCAGTATATTTGCTATATATATAACGTGGAAGTAACTCAATATATTGC 1246 0.4045 MCFVKMLYKSSMRPLKMVMAKLLTVLLLIEVFAHGFRYGADGLTMNYYLMSCPFVEPVVKNIVNRALQDDPTLAAGLIRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPGNLSLRGFEVIDDIKEELERQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRSFGQRGFSAQEMVALSGAHTLGVARCASFKNRLDQVDPTLDAQFAKTLSRTCSSGDNAQQPFDATSNDFDNVYFNALLRKNGVLTSDQTLYTSPKTRNFVTAYAFNQAMFFFDFQQAMVKMGLLEVKDNSNGDVRDNCRKIN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00490 331 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Pste4g00490 331 Gene3D - 46 331 - -
Pste4g00490 331 SUPERFAMILY Heme-dependent peroxidases 42 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 FunFam Peroxidase 178 310 - -
Pste4g00490 331 ProSiteProfiles Plant heme peroxidase family profile. 42 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 FunFam Peroxidase 46 183 - -
Pste4g00490 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Pste4g00490 331 Gene3D Peroxidase, domain 2 178 310 - -
Pste4g00490 331 CDD secretory_peroxidase 42 330 IPR033905 GO:0004601|GO:0042744
Pste4g00490 331 PANTHER PEROXIDASE 25-RELATED 28 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g00490 331 Pfam Peroxidase 59 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00490 Pste-Chr4 3717574 3719970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00490 16 331 Peroxidase AT4G33420 70.886 1.96e-167 469