Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00486 AAAATTAGTCAGCCTTAGGGTGCTGATTCACACATTATATAAGCCAAGGCAATGCTGTTGATGCAAACAACCAAACCTGTTTAAGCTTGCAGTAATGGGTTCGACGAATAACTCGGAAGCCATTCAGCTCTTTGAAGGCCAAAATGTTTTATACTCCCTCACATATAGCCACCTAAAACCTTTGTGTCTTAGGTGGGCTGTCCAACTAGGTATTCCGGACATAATCCACAACCATGGCAAACCCATTACCCTTCCTCAGCTGATCTCAACCCTTCAGATTCCACCACCTAAGGCTGCTTTTGTGCACCGCTTGATGCGCTTTTTGGCACACAATGGAATCTTTGATATCCATGAGAGCCAAGAACATCATCAATTCACATATGCTCTAACCGCTGCATCAAAGCTTCTAGTCAGTGGTAGTGGCCACTGTTTAGCTCCAATAGTTCGGTTGAATACTGATCCACTTCTCATGAGTAAATATCATCACCTGGGCGAATGGATTCGTGGGGATGACCCCACACTCTATGAGACTGCCTTGGGTACTAGTGTTTGGGGACTCATTGAGAAAGACCCTACATATCTTACTCTCTTCAGTGAGGGTATGGCCAGTGATTCCCAAATGGTTAACTTGGCCCTCAAAAATTGCACTTCTGTTTTTCAGGGGTTAGATTCCATCGTTGATGTTGGTGGTGGAACTGGGACCACTGCCAGAATCATCTCTGAGGCATTTCCCAAGTTGAAATGTCTTGTGCTTGACCTTCCTCATGTTGTAGCAAACTTGACAGGAACCCACCATTTAAGCTTTGTTGCTGGTGACATGTTCAAATCTATCCCTCAAGCTGCTGCAGTTCTACTCAAGTGGGTTTTACATGATTGGAACGACGAAAGTTGCATAAAGATCCTGAGAAACTGTAGAGATTCTATCTGGAGCAACAAAGGAAACAGAGGGAAAGTGATTATCATAGAAACAGTAATTAATGAGAAGGTGGATAGCCCGGATATAACTCAAACAAAGCTGGGTTTGGATATATCCATGTTGAGCTTAAATGGAAAAGAGCGAACTGAAGAAGAATGGAAACAACTCTTCATCGAAGCAGGATTCAAGAGCTACAAAATATTTCCTATTTTTGGTTTTAGATCTCTTATTGAGGTCTATCCTTAGGTACTTTTTAATGCTGTCTATGAAATAACTTCACAAAATATTGTTCTATGTACCAATTTCTCCTTTCCTATTTAGCAAAATTAAATTGAATAAGGTTCTGCTCGCCATATACTCTGTAAGCTGTAACAGTGACTTATTTGTTGTTAGAAGCATTCATTGCCTCATCTTTTGTAATAATACTCTTATTGTTTCTTATTAATAAGGAAAATCACAGTAGTAAAAC 1385 0.4058 MGSTNNSEAIQLFEGQNVLYSLTYSHLKPLCLRWAVQLGIPDIIHNHGKPITLPQLISTLQIPPPKAAFVHRLMRFLAHNGIFDIHESQEHHQFTYALTAASKLLVSGSGHCLAPIVRLNTDPLLMSKYHHLGEWIRGDDPTLYETALGTSVWGLIEKDPTYLTLFSEGMASDSQMVNLALKNCTSVFQGLDSIVDVGGGTGTTARIISEAFPKLKCLVLDLPHVVANLTGTHHLSFVAGDMFKSIPQAAAVLLKWVLHDWNDESCIKILRNCRDSIWSNKGNRGKVIIIETVINEKVDSPDITQTKLGLDISMLSLNGKERTEEEWKQLFIEAGFKSYKIFPIFGFRSLIEVYP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00486 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Pste4g00486 355 FunFam Coniferyl alcohol 9-O-methyltransferase 2 105 - -
Pste4g00486 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Pste4g00486 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 354 IPR029063 -
Pste4g00486 355 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Pste4g00486 355 PANTHER O-METHYLTRANSFERASE 25 340 IPR016461 GO:0008168
Pste4g00486 355 Pfam O-methyltransferase domain 129 337 IPR001077 GO:0008171
Pste4g00486 355 FunFam O-methyltransferase ZRP4 107 355 - -
Pste4g00486 355 SUPERFAMILY "Winged helix" DNA-binding domain 12 109 IPR036390 -
Pste4g00486 355 Gene3D Vaccinia Virus protein VP39 108 355 IPR029063 -
Pste4g00486 355 Gene3D - 1 105 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00486 Pste-Chr4 3686487 3687995 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00486 1 341 Monolignol Biosynthesis Gene Families AT5G54160 31.818 1.41e-54 181