Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00482 ATGGGTTCCATGAATAACTCGGAAGCCATTGAGCTCTTTGAAGGCCAAAATCATGTGTACATGCAGATTTTTGGCTACCTAAAAACTATGTGTCTTAAGTGGGCTGTCCAACTAGGTATTCCGGACATAATCCACAACCATGGCAAACCTATTACCCTTCCTCAGTTGATCTCAACCCTGCAGATTCCACCACCTAAGGCTGCTTTTGTGCACCGCTTGATGCGCTTTTTGGCACACAATGGAATCTTTGATGTCCATGAGAGCCAAAAAGATCATGGATTAGCATATGCACTAACCCCATCATCAAGGCTTCTAGTCAGTGGTAGTGCTCATTGTTTGTCTCCAATGGTTCGCTTGATCACTGATCCACTTCTCATGAGTAAATACCATCACTTGGGGGATTGGATTCGTGGGGATGACCCCACACTCTATGATACAGCCTTAGGCACAAGCATTTGGGGACTTATTGAGAATGACCCTACATATTTGACTCTCTTCAGTGAGGGTATGGCCAGTGATTCCCAAATGGTTGACTTGGCCCTCAAAACTTGCACTTCTGTTTTTGAGGGGCTAGATTCCATCGTGGATGTAGGTGGTGGAACTGGAACCACTGCCAGAATCATCTCTGAGGCATTTCCCAAGTTGAAATGTCTTGTTCTTGATCTTCCCCAGGTTATAGCAAACTTGACAGGAACCAATAATTTAAGTTTTGTTGCCGGTGACATGTTCCAGTTTATCCCTCAAGCTGATGCACTGCTGTTAAAGTGGGTTTTACATGATTGGAATGACGAAAATTGCATAAAGATCCTGAAAAACTGCAAAGATTCTATCTCAAGCAATGGCCAAAAAGGGAAGTTGATTATCATAGAAACAGTAATAAATGAAAAGCTAGACTACAAAGATATGACTCATACAAAGCTGAGTATGGATATAACTATGTCGGCCATAAATGGAAAAGAGCGAACTGAAGAAGAATGGAAACAACTCTTCATTGAAGCCGGATTCAAACACTACAAAATATTTCCCATTTTTGGTTTTAGATCTCTTATTGAAGTCTATCCTTAG 1065 0.4169 MGSMNNSEAIELFEGQNHVYMQIFGYLKTMCLKWAVQLGIPDIIHNHGKPITLPQLISTLQIPPPKAAFVHRLMRFLAHNGIFDVHESQKDHGLAYALTPSSRLLVSGSAHCLSPMVRLITDPLLMSKYHHLGDWIRGDDPTLYDTALGTSIWGLIENDPTYLTLFSEGMASDSQMVDLALKTCTSVFEGLDSIVDVGGGTGTTARIISEAFPKLKCLVLDLPQVIANLTGTNNLSFVAGDMFQFIPQADALLLKWVLHDWNDENCIKILKNCKDSISSNGQKGKLIIIETVINEKLDYKDMTHTKLSMDITMSAINGKERTEEEWKQLFIEAGFKHYKIFPIFGFRSLIEVYP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00482 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 353 IPR029063 -
Pste4g00482 354 CDD AdoMet_MTases 194 281 - -
Pste4g00482 354 Pfam O-methyltransferase domain 129 336 IPR001077 GO:0008171
Pste4g00482 354 Gene3D - 1 105 IPR036388 -
Pste4g00482 354 FunFam Coniferyl alcohol 9-O-methyltransferase 2 105 - -
Pste4g00482 354 PANTHER O-METHYLTRANSFERASE 29 339 IPR016461 GO:0008168
Pste4g00482 354 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
Pste4g00482 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Pste4g00482 354 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pste4g00482 354 Gene3D Vaccinia Virus protein VP39 107 354 IPR029063 -
Pste4g00482 354 FunFam O-methyltransferase ZRP4 107 354 - -
Pste4g00482 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00482 Pste-Chr4 3653136 3654294 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00482 30 340 Monolignol Biosynthesis Gene Families AT5G54160 33.746 1.06e-49 168