Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00478 GGCTGTTCAACTTGGTGTTCCGATATAATCCACAACCACAACCACAACCACACCAAACCCATTACCCTTCCTGAATTGGTCTCCACCTTGCAAATTCCACCATCCAAGTCTGATTTTGTCAAACGCTTGATGCGTTTTTTGGCACACAATGGAATCTTTCATATCCACGAGAGCCAACAAGATCATGAATTAGCATATGCCCTAACTCCAGCATCAAAGCTTTTAGTCACTGGCACTGCCCATTGTTTATCTCCAATCGTTTTATCCATGTCTGATCCACTTTTCATTAGTATATGCCATGAATTGGCGGAATGGATTCGTGGGGAGGACCCCACGGTATGGGAGACGACCAATGGAACAACCTTTTGGGGACATATTCAGAAAGAGCCTGCATATTTGAGTCGCTTCACTGAGGCAATGGCAAGTGATTCCCAATTGATAGAATTGACACTTAAAAGTTGCTCTTCTGTTTTTGAGGACATAGATTCCATGGTGGATGTTGGTGGTGGAACTGGAACCACAGCCAGAATCATCTGTCAGGTATTTCCTAAGTTGAAATGTGTCGTGCTTGACCTTCCTCATGTTATAGCAAACTTGACAGAAACCCATAATTTAAGTTTTCTTGCTGGTGACATGTTCACATCTATTCCTCCAGCTGATGCAGTTCTACTAAAGTGGATCTTGCATGATTGGAATTATGAAAATTGCATTAAGATCTTAAGAAATTGTAAAGAGTCTGTTTCAAGCAAAGGCAATAGAGGGAAAATAATGATCATTGATACAGTAATAAATGAGAAGCTAGATGACCGGAATATGACACAAACAAAGCTTTGTTTAGATATGATTATGTTGACTATGGGTGGGAAAGAACGAACTGAAAAAGAATGGAAAGAACTCTTCATTGAAGCAGGATTCAAACACTACAAAATATTTCCCATTTTCGGTTTTAGATCTTTGATTGAGGAGTCTGTTTCAAGCAAAGGCAATAGAGGGAGAATAATGATCATTGATACAGTAATAAATGAGAAGCTAGATGACCGGAATATGACACAAACAAAGCTCTGTTTTGATATGATTATGTTGACTATAGGTGGAAAAGAACGAACTGAAAAAGAATGGAAGGAACTCTTCACTGAAGCAGGATTCAAACACTACAAAATATTTCCCATTTTCGGTTTTAGATCTTTGATT 1191 0.3896 GCSTWCSDIIHNHNHNHTKPITLPELVSTLQIPPSKSDFVKRLMRFLAHNGIFHIHESQQDHELAYALTPASKLLVTGTAHCLSPIVLSMSDPLFISICHELAEWIRGEDPTVWETTNGTTFWGHIQKEPAYLSRFTEAMASDSQLIELTLKSCSSVFEDIDSMVDVGGGTGTTARIICQVFPKLKCVVLDLPHVIANLTETHNLSFLAGDMFTSIPPADAVLLKWILHDWNYENCIKILRNCKESVSSKGNRGKIMIIDTVINEKLDDRNMTQTKLCLDMIMLTMGGKERTEKEWKELFIEAGFKHYKIFPIFGFRSLIEESVSSKGNRGRIMIIDTVINEKLDDRNMTQTKLCFDMIMLTIGGKERTEKEWKELFTEAGFKHYKIFPIFGFRSLI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00478 397 SUPERFAMILY "Winged helix" DNA-binding domain 9 78 IPR036390 -
Pste4g00478 397 Pfam O-methyltransferase domain 100 306 IPR001077 GO:0008171
Pste4g00478 397 Pfam O-methyltransferase domain 329 383 IPR001077 GO:0008171
Pste4g00478 397 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 324 IPR016461 GO:0008168
Pste4g00478 397 PANTHER O-METHYLTRANSFERASE 323 386 IPR016461 GO:0008168
Pste4g00478 397 Gene3D - 6 75 IPR036388 -
Pste4g00478 397 Gene3D Vaccinia Virus protein VP39 323 397 IPR029063 -
Pste4g00478 397 Gene3D Vaccinia Virus protein VP39 77 322 IPR029063 -
Pste4g00478 397 Pfam Dimerisation domain 8 48 IPR012967 GO:0046983
Pste4g00478 397 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 321 IPR029063 -
Pste4g00478 397 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 331 397 IPR029063 -
Pste4g00478 397 FunFam O-methyltransferase ZRP4 77 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00478 Pste-Chr4 3622132 3632357 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00478 331 395 Monolignol Biosynthesis Gene Families AT1G51990 42.647 1.17e-06 48.1