Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00477 AGCTTCTGCTCCCCCCCACCCTCTTTCTTTTTATTTATTTTATCGTTGGCAACTCAAAGGTACACCAACCACCATATATCAGGTATTATCAGTGTGTGACTCCTAAGGAATTTGCAGAGCCCCTACTAACATCTTCGTCTTTTCCCTTTCTCTACTCATATTCCTCTTCTCCCTCTCTTTTGCTCCCTCTCCTTTCTGTTTGCGTGGGGAGCAAAAAGGTCTTGCTTTTTCTTTCTCACATATATATATTTATCAGACACGAGGGTTCCAAAAGAAACTATTGCTCCTGTGAGGAGGGGGAGACGTACCCTTTTGGTGTTGAGGAAGAAACATAATAAAAGTGACGGTTTTTTTTACTCTACCAAGGTTTGGAAATATATTTTTGTTGCCAAGAAGATCAAAAAGAGAAAATGGGTAGTTGTGGAAGAGAAGGAGCAGTGAGGCAATATATAAGATCAAAGGTTCCTCGTTTAAGGTGGACTCCTGAGCTGCACCGTTGCTTTGTTCATGCTATTGATAGCCTCGGAGGTCATCATAAGGCTACACCTAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTCACAATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGGGGTGATTTGGGCAGACAAGGTAGGACAGCCTCCCAACATAGGAAGCAAGCTTTTGAGGAGCATGATGATGGGTGTGTTGATGAAGTGAATGATGTGGGTGTCGAGTACTCATGTTCGAAAACCATGGGAAGAGAATCTGATTCCTTCTTCGGCCACAGCAATCTCCCTCCAAAAAGAGCTAGAATCGAGACGCGGAGTTCCATCTCAGAGAGTCTGCAATGCAGCCAAAGATTATGTGATGCAGTTTCAAATCCGTACTGTTTTTATGATTATCTGCAGAAGCCTATGGCTGTGGCTGAGCATAAGAAGGGAATAAAGGAGTTATGTGAAGCTTCAACATGGCAGACACAGTCCCATTCCTCACTGTTACCAGATCATTTTCCCAACCTCAGTTCATTCAAACGTCCTAACCAACAATCTGATTTCCTTCAGGTTAGGAAATTAAATGAAGGAAAGAGCACTTCCCAGCCAATGAATGTAGTTGTGAACAATGAGACAGCTCATGCAGAAGTTGAAGAAGATGCAGGAGGGTATGAATTGTCATTATCGCTCACATTGCCAAATCCTTCACCTCAAAGAAGTAATGCTTCTTCGGCCAGTGAGATCAGTGAGGCAATCTCATCATGCCCTGCTGTGTTTAGCAACTACAAGGACTGCTCTAGTTTATCCACTGTCAAAGAAAGAATTAATTTGGATCTATCTTTAGCCCTATGTGGCAACTGATTTGATGCTCATATTGTAAAATTAATCTATTATAGGCATAATCCAATGTAGCTCTTTTTTATTGCCTTGACTAACAATTTTGGTTGTTTTCTTG 1449 0.4189 MGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTASQHRKQAFEEHDDGCVDEVNDVGVEYSCSKTMGRESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVSNPYCFYDYLQKPMAVAEHKKGIKELCEASTWQTQSHSSLLPDHFPNLSSFKRPNQQSDFLQVRKLNEGKSTSQPMNVVVNNETAHAEVEEDAGGYELSLSLTLPNPSPQRSNASSASEISEAISSCPAVFSNYKDCSSLSTVKERINLDLSLALCGN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00477 314 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Pste4g00477 314 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Pste4g00477 314 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Pste4g00477 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 120 IPR046955 GO:0003700
Pste4g00477 314 FunFam Myb family transcription factor 17 75 - -
Pste4g00477 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Pste4g00477 314 Gene3D - 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00477 Pste-Chr4 3621506 3625430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00477 1 74 G2-like Transcription Factor Family AT1G14600 74.684 2.47e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste4g00477 Myb_DNA-binding 1.3e-05 CL0123