Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00472 TTTCCAAATCGATCATGGCTATGTCAGAAATGCTTGGAAACTCCGTCAAACTCAGACCACCCACCAGGTCTGCTCCATCACCATCTACCTTCAACATTGTTGCTCTTTTCTCTAAGAAGAAGCCTGCGCCACCTCCTCCTAAGAAAAAGCCTGTTGCTGTTTCCCCTGCCAGTGAGGAACTCGCAAAGTGGTATGGTCCCGACAGAAGGATTTTCTTGCCAGAGGGTCTCTTGGACCGATCTGAGATCCCCGAGTACTTGACCGGAGAAGTGCCTGGAGAGCATGTCTATGGTTATGACCCGTTTGGTCTTAGCAAGAAGCCAGAGGACTTTGCCAAATATCAGGCGTTTGAGTTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCTTTTAACAAATACGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACTGGAGCTTTGCTTCTTGATGGTGGTACGTTGAACTACTTTGGGAAACCCATCCCCATCAATCTTGTTGTTGCTGTTATTGCTGAGATAATTCTCGTGGGTGGTGCTGAGTACTACAGAATCATTAATGGCCTGGATTTCGAAGACAAGCTTCACCCAGGTGGTCCATTCGACCCATTGGGGCTGGCAAATGATCCAGACCAAGCTGCATTGTTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCAATGCTTGGTTTCTATTTCCAAGCTTATGTCACCGGAGAAGGTCCAGTTGAGAACTTAGCAAAACATCTCAGTGACCCTTTTGGTAACAACTTACTCACTGTGATTTCTGGGTCTGCTGAGAGGGCTCCAACTCTGAATCAATCATATTTATGCTCTTATATGTCCAATCTTAAA 890 0.4607 MAMSEMLGNSVKLRPPTRSAPSPSTFNIVALFSKKKPAPPPPKKKPVAVSPASEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGEHVYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLVVAVIAEIILVGGAEYYRIINGLDFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGSAERAPTLNQSYLCSYMSNLK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00472 292 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 44 268 IPR001344 GO:0009765|GO:0016020
Pste4g00472 292 Pfam Chlorophyll A-B binding protein 79 242 IPR022796 -
Pste4g00472 292 FunFam Chlorophyll a-b binding protein, chloroplastic 66 279 - -
Pste4g00472 292 SUPERFAMILY Chlorophyll a-b binding protein 58 269 - -
Pste4g00472 292 Gene3D Chlorophyll a/b binding protein domain 66 279 - -
Pste4g00472 292 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00472 Pste-Chr4 3571676 3574112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00472 1 279 Chloroplast and Mitochondria Gene Families AT4G10340 79.859 5.12e-146 409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00472 4 3571676 3574112 Pste4g00472 4 3571676 3574112 ECH
Pste9g01281 9 11324648 11327263 Pste4g00472 4 3571676 3574112 PCT