Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00469 GTTCACTATCTCACTTGTCTTGTCTGCGCCTTTTCCACTTCCTTCTCCAAATCTCTTTGCTTTAGACGGAAAGACAGAGATAGAGCGTTACATAGCTTCTCATTCAAAAAACCAAAAGTCCAGAACTTGTTGAATCCAAAGCCTTTCCTTCATTCAGAACTGAAAATGGGGTTTTCAGTACTGCTGCTTTTGTTTTCTCTTGTGTTTTTGCTCTCAAACCCAAGGTGGGTGTGTGGAAATGGAGAGCTAAGAGCGCTGATGGATATGAAAGCCAGTTTGGATCCGGAAAACTTTTATCTACCCTCTTGGACTATCAATGGTGACCCATGTGATGGATCTTTTGAAGGAGTAGCATGCAATGCGAAGGGTCAGGTGGCTAACATTTCTTTGCAGGGAAAGGGACTCTTAGGGAAGCTTTCACCAGCCATTAGTGGCCTCAAGCACTTGACTGGACTCTACTTGCATTATAACGCTTTATATGGAGACATACCAAGAGAGATTGCCAACTTGACTGAGCTTGTTGATATGTATTTGAATGTGAATAATCTGTCTGGAGAAATCCCTCGTGAGATCGCCAGCATGGAAAACTTGCAAGTTTTGCAGCTATGTTATAATCACTTGACAGGAAGCATTCCCACGCAGCTTGGGGCTTTAAAAAAGCTGAGTGTCGTTGCTTTGCAGTCGAACCAGTTAACTGGTGCCATCCCTGCTAGTCTAGGTGATCTGGATATGCTGGTGAGGCTAGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCACAAGCCTAGCCGATGCTCCTTCACTGAAAGTCTTGGATGTTCATAACAATTCCCTTTCTGGGAGTGTACCTCGTGCTCTCAAGCGACTAGATGATGATGGATTTCTATATGAAAACAATCTGGGATTATGTGGAGTTGAGTTTTCATCTCTGAAAGCTTGCAATGCTTCGCATCATGTCAATCCAAGCAGACCTGAACCTTATGGAACAGCCACAAGTGATATCCCAGAAACTGCAAATGTGAAGTTACCTTGCAATGGAAGTCAATGCCTTAATTCATCAAAATCCAATCACTCCGCATCAATTACTGTTGGCATTTTTGTATTAATAATTGCACTGTCCGCAGTTGGTGTTTTGACATTCATATTATATCGTCGGAAAAAACAAAGGCTTGGAGATTCTTTTCATATCACTGACAGCCGGCTAAGTACCGATGAAGCCATGTGTAGTGTATATAGAAAAAATGGATCTCCTTTGGTCAACCTTGAGTACTCTACTGGATGGGACCCTTTGGCTGATAGTAGGAATTTCAATGGGTATAGCCAAGATATATTCCAGAATTTGAGGTTCAACTTGGAAGAAGTGGAGTCAGCTACTCAATATTTCTCAGAGTTGAATTTGTTGGGGAAGAACTGTTATAGTGCAACATATAGAGGAGTTCTAAGAGATGGATCCGTTGTTGCGGTCAAGAGCATCAGCAAAACTAGTTGCAAGTCGGATGAAGCCGAGTTTATGAAGGGATTGAACGTGTTGACCTCACTGAGGAATGATAATGTAGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGTGAATGCTTTCTGATTTATGATTTTGTTTCTAATGGAAACCTTTCACGCTTCCTTGATGTTAAAGAAGGAGATGGAGAAGTCCTGGAATGGTCTACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATGGCATATTTACATGCATACAGAGCAAACAAACCCATTCTGGTTCATCAAAACATCTCAGCTAACAAAGTTCTCATTGATCGGCGGTACAATCCATTGCTAGCAGATTCTGGCCTGTACAAGCTGCTTACCAATGATATTGTCTTCTCTGAACTCAAGGGTAGTGCAGCAAAGGGTTACCTAGCTCCTGAATATGCCACTATTGGCCGGTTTGCTGAGACAAGTGATGTTTATGCTTTTGGGGTGCTGCTTTTCCAGATCCTTTCAGGGAAGCACCAGATCACCAACTCAATAAGGCTTGCTGCAGAGTCCTCCAAGTTCCAAGAATTCATGGACCCAATTCTCAATGGAAGATACTTTGAATATGAAGCATCTAAACTGGCAAAAATAGCTTTGCTTTGCTCCCATGAGTCTCCTTTTGAGAGGCCATCAATGGAAACAATTGTTCTAGAACTGGGGAATTGTAGTAGCTGCCTTTGATTTCTATTATTACCATCCATTTATGTGGTAAATGGGCTGGTACGATGATTAGTTAGTGCTAACTGCTTATGGGTGTAGCCTTTTAGAGATTTAACATTGTCCTGTGTCCTTTATCTTAAGGACTCGCTAGCTTTTATTTCATTGCTTTGGACAGTAGTGGCTTGTATTTTAGAGAATTGACATTTCTTCCTTAAATCAACTGTAGCTTTAATTGTTGAATGTATTTTTCTGTACAAGGTGAATGCATCTTGAGTTTTCAG 2465 0.4142 VHYLTCLVCAFSTSFSKSLCFRRKDRDRALHSFSFKKPKVQNLLNPKPFLHSELKMGFSVLLLLFSLVFLLSNPRWVCGNGELRALMDMKASLDPENFYLPSWTINGDPCDGSFEGVACNAKGQVANISLQGKGLLGKLSPAISGLKHLTGLYLHYNALYGDIPREIANLTELVDMYLNVNNLSGEIPREIASMENLQVLQLCYNHLTGSIPTQLGALKKLSVVALQSNQLTGAIPASLGDLDMLVRLDLSSNNLFGSIPTSLADAPSLKVLDVHNNSLSGSVPRALKRLDDDGFLYENNLGLCGVEFSSLKACNASHHVNPSRPEPYGTATSDIPETANVKLPCNGSQCLNSSKSNHSASITVGIFVLIIALSAVGVLTFILYRRKKQRLGDSFHITDSRLSTDEAMCSVYRKNGSPLVNLEYSTGWDPLADSRNFNGYSQDIFQNLRFNLEEVESATQYFSELNLLGKNCYSATYRGVLRDGSVVAVKSISKTSCKSDEAEFMKGLNVLTSLRNDNVVRLRGFCCSRGRGECFLIYDFVSNGNLSRFLDVKEGDGEVLEWSTRVSIVKGIAKGMAYLHAYRANKPILVHQNISANKVLIDRRYNPLLADSGLYKLLTNDIVFSELKGSAAKGYLAPEYATIGRFAETSDVYAFGVLLFQILSGKHQITNSIRLAAESSKFQEFMDPILNGRYFEYEASKLAKIALLCSHESPFERPSMETIVLELGNCSSCL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00469 734 Gene3D Ribonuclease Inhibitor 196 306 IPR032675 -
Pste4g00469 734 Pfam Leucine rich repeat N-terminal domain 81 120 IPR013210 -
Pste4g00469 734 FunFam Leucine-rich repeat receptor-like kinase 81 190 - -
Pste4g00469 734 SUPERFAMILY L domain-like 78 289 - -
Pste4g00469 734 FunFam Protein NSP-INTERACTING KINASE 2 192 315 - -
Pste4g00469 734 Pfam Leucine rich repeat 196 255 IPR001611 GO:0005515
Pste4g00469 734 SUPERFAMILY Protein kinase-like (PK-like) 437 727 IPR011009 -
Pste4g00469 734 Gene3D Ribonuclease Inhibitor 81 193 IPR032675 -
Pste4g00469 734 Gene3D Phosphorylase Kinase; domain 1 432 540 - -
Pste4g00469 734 FunFam Protein NSP-INTERACTING KINASE 2 541 731 - -
Pste4g00469 734 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 354 727 - -
Pste4g00469 734 FunFam Protein NSP-INTERACTING KINASE 2 433 540 - -
Pste4g00469 734 ProSiteProfiles Protein kinase domain profile. 462 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00469 734 Gene3D Transferase(Phosphotransferase) domain 1 541 733 - -
Pste4g00469 734 Pfam Protein tyrosine and serine/threonine kinase 467 726 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00469 Pste-Chr4 3550589 3553809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00469 63 575 Miscellaneous Gene Families AT4G22730 54.269 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pste4g00469 PK_Tyr_Ser-Thr 7.4e-35 CL0016